RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 WSCD1Q658N2 575 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 E4F1Q66K89 784 aaPredicted RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 LIMS2Q7Z4I7 341 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 PALB2Q86YC2 1186 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 DCP1BQ8IZD4 617 aaKnown RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 ADGRF2Q8IZF7 708 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 PDCL2Q8N4E4 241 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 DTWD2Q8NBA8 298 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 FBXL13Q8NEE6 735 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 C2orf15Q8WU43 125 aaKnown RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 DIO2Q92813 273 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 EEF2KMTQ96G04 330 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 RIPOR3Q96MK2 946 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 NECTIN4Q96NY8 510 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 FCRL3Q96P31 734 aaPredicted RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 DNAI2Q9GZS0 605 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 XYLT2Q9H1B5 865 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 ADAM7Q9H2U9 754 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 THAP9Q9H5L6 903 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 FAM124BQ9H5Z6 455 aaPredicted RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 IPPKQ9H8X2 491 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 HSFX1Q9UBD0 423 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 AFF4Q9UHB7 1163 aaKnown RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 L1RE1Q9UN81 338 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 TIMM13Q9Y5L4 95 aaPredicted RBP8.12□□□□□ -1.11
CASP4-212ENST00000533730 MRFAP1Q9Y605 127 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 MYO7AQ13402 2215 aa8.12□□□□□ -1.11
CASP4-212ENST00000533730 SHISA3A0PJX4 238 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 FAM170BA6NMN3 283 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 PRRG1O14668 218 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 PMM2O15305 246 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 P4HA2O15460 535 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 MBTPS2O43462 519 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 NRDCO43847 1150 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 H2AFYO75367 372 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 PAPLNO95428 1278 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 VNN1O95497 513 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 ASS1P00966 412 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 C8AP07357 584 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 WARSP23381 471 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 HTR3AP46098 478 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 GCLMP48507 274 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 SEPHS1P49903 392 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 ARPP19P56211 112 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 TFF2Q03403 129 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 PPP3CAQ08209 521 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 KCNAB2Q13303 367 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 PLD1Q13393 1074 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 MAPRE1Q15691 268 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 SOWAHAQ2M3V2 549 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 PPM1LQ5SGD2 360 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 ATAT1Q5SQI0 421 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 ZFYVE27Q5T4F4 411 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 CAVIN1Q6NZI2 390 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 SYCE2Q6PIF2 218 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 OGFOD3Q6PK18 319 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 FBXL6Q8N531 539 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 TTC39CQ8N584 583 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 RCBTB1Q8NDN9 531 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 SPPL2BQ8TCT7 592 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 SLC35C1Q96A29 364 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 FAM84AQ96KN4 292 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 Q96M66 194 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 MMS19Q96T76 1030 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 ACBD6Q9BR61 282 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 NAT10Q9H0A0 1025 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 ZCWPW1Q9H0M4 648 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 S1PR5Q9H228 398 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 SNX25Q9H3E2 840 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 DDX43Q9NXZ2 648 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 PPARGC1AQ9UBK2 798 aaKnown RBP8.11□□□□□ -1.11
CASP4-212ENST00000533730 COQ4Q9Y3A0 265 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.11□□□□□ -1.11
CASP4-212ENST00000533730 SCN1AP35498 2009 aa8.11□□□□□ -1.11
CASP4-212ENST00000533730 WDR27A2RRH5 827 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 WNT9AO14904 365 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 ADAM12O43184 909 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 LRG1P02750 347 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 FMO5P49326 533 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 NOP14P78316 857 aaKnown RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 RBM10P98175 930 aaKnown RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 SMAD2Q15796 467 aaKnown RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 INO80DQ53TQ3 878 aaPredicted RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 RARS2Q5T160 578 aaKnown RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 GPR158Q5T848 1215 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 GPR149Q86SP6 731 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 ELMOD1Q8N336 334 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 ENOX1Q8TC92 643 aaKnown RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 TAS1R2Q8TE23 839 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 SUSD6Q92537 303 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 FBXW5Q969U6 566 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 TNIP3Q96KP6 325 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 CNOT6LQ96LI5 555 aaKnown RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 ELAC2Q9BQ52 826 aaKnown RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 MS4A5Q9H3V2 200 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 MMRN2Q9H8L6 949 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 CYP3A43Q9HB55 503 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 CYP4F11Q9HBI6 524 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms