RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 AJAP1Q9UKB5 411 aaPredicted RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 ANGPTL2Q9UKU9 493 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 ASCC3Q8N3C0 2202 aaKnown RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 TPRP12270 2363 aaKnown RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 ADAMTS9Q9P2N4 1935 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 METTL12A8MUP2 240 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 KCNU1A8MYU2 1149 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 F5H5T6 163 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 GIPC1O14908 333 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 OPHN1O60890 802 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 IGLV3-19P01714 112 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 IGLV3-25P01717 112 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 DNTTP04053 509 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 PNMA6AP0CW24 399 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-211ENST00000533492 CCR1P32246 355 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 PITX1P78337 314 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-211ENST00000533492 DRAP1Q14919 205 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-211ENST00000533492 MIIPQ5JXC2 388 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 DCAF12L1Q5VU92 463 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 FAM183BPQ6ZVS7 135 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 FAM71AQ8IYT1 594 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 MINDY1Q8N5J2 469 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 LMLNQ96KR4 655 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 SLC2A13Q96QE2 648 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 SAMSN1Q9NSI8 373 aaKnown RBP15.98■□□□□ 0.15
CPSF1-211ENST00000533492 LMBRD1Q9NUN5 540 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 NFE2L3Q9Y4A8 694 aa15.98■□□□□ 0.15
CPSF1-211ENST00000533492 A0A1B0GTW7 788 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 EEF1GP26641 437 aaKnown RBP15.97■□□□□ 0.15
CPSF1-211ENST00000533492 PMLP29590 882 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 SLC6A3Q01959 620 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 ZBTB16Q05516 673 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 ZNF252P-AS1Q0IIN9 211 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 NME3Q13232 169 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 TTC31Q49AM3 519 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-211ENST00000533492 TCP11X2Q5H9J9 407 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 FSCBQ5H9T9 825 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 PITRM1Q5JRX3 1037 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 KLHDC7AQ5VTJ3 777 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 RNF219Q5W0B1 726 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-211ENST00000533492 MMS22LQ6ZRQ5 1243 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 TMEM35BQ8NCS4 154 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 DEFB124Q8NES8 71 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 DNASE2BQ8WZ79 361 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 PLCB1Q9NQ66 1216 aa15.97■□□□□ 0.15
CPSF1-211ENST00000533492 INTS6Q9UL03 887 aaKnown RBP15.97■□□□□ 0.15
CPSF1-211ENST00000533492 RNASEH1O60930 286 aaKnown RBP15.96■□□□□ 0.15
CPSF1-211ENST00000533492 ERBB2P04626 1255 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 TPM2P07951 284 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 SRPRAP08240 638 aaKnown RBP15.96■□□□□ 0.15
CPSF1-211ENST00000533492 NOS2P35228 1153 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 NNMTP40261 264 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 RPS14P62263 151 aaKnown RBP15.96■□□□□ 0.15
CPSF1-211ENST00000533492 KCNMA1Q12791 1236 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 MTA1Q13330 715 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 EIF4EBP2Q13542 120 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-211ENST00000533492 PTPN20Q4JDL3 420 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 RABGAP1LQ5R372 815 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 ZNF776Q68DI1 518 aaPredicted RBP15.96■□□□□ 0.15
CPSF1-211ENST00000533492 OLFML1Q6UWY5 402 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 ZDHHC17Q8IUH5 632 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 ZCCHC9Q8N567 271 aaKnown RBP15.96■□□□□ 0.15
CPSF1-211ENST00000533492 KDM1BQ8NB78 822 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 GANCQ8TET4 914 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 SNX19Q92543 992 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 GBP4Q96PP9 640 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 BTBD1Q9H0C5 482 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 PCED1AQ9H1Q7 454 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 MTG2Q9H4K7 406 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 EIF2B4Q9UI10 523 aaKnown RBP15.96■□□□□ 0.15
CPSF1-211ENST00000533492 ERVW-1Q9UQF0 538 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 NCKAP1Q9Y2A7 1128 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 FHOD1Q9Y613 1164 aa15.96■□□□□ 0.15
CPSF1-211ENST00000533492 M0QYT0 321 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 BCAT2O15382 392 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 DAB1O75553 588 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 CYP11B1P15538 503 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 ACSL1P33121 698 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 RNASE9P60153 205 aaKnown RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 ECT2LQ008S8 904 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 SFSWAPQ12872 951 aaKnown RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 SEMA3BQ13214 749 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 SLC12A1Q13621 1099 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 HNRNPA1L2Q32P51 320 aaKnown RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 TTC39BQ5VTQ0 682 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 DPY19L2P1Q6NXN4 242 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 SLC26A9Q7LBE3 791 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 DHX40Q8IX18 779 aaKnown RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 OR2I1PQ8NGU4 316 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 ENOX1Q8TC92 643 aaKnown RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 MYO19Q96H55 970 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 RPRD1AQ96P16 312 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-211ENST00000533492 PPP1R9BQ96SB3 815 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 ZDHHC5Q9C0B5 715 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 RRN3Q9NYV6 651 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 SCML1Q9UN30 329 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 PCNX2A6NKB5 2137 aa15.95■□□□□ 0.14
CPSF1-211ENST00000533492 ACACBO00763 2458 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms