RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 CCDC115Q96NT0 180 aa7.12□□□□□ -1.27
TGFBR3-210ENST00000533089 UMODL1Q5DID0 1318 aa7.12□□□□□ -1.27
TGFBR3-210ENST00000533089 C5orf58C9J3I9 102 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 NR4A1P22736 598 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 FKBP1AP62942 108 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 CXCL9Q07325 125 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 TWF1Q12792 350 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 NECTIN1Q15223 517 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 GLB1LQ6UWU2 654 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 RAB43Q86YS6 212 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 FMR1NBQ8N0W7 255 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ATPAF2Q8N5M1 289 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 C2orf49Q9BVC5 232 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 CINPQ9BW66 212 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 CDADC1Q9BWV3 514 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 KLHL3Q9UH77 587 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 MAD2L2Q9UI95 211 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 DGKBQ9Y6T7 804 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 C9IYK1 514 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 TCEA1P23193 301 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 FCGRTP55899 365 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PPP4CP60510 307 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SNX31Q8N9S9 440 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 AKT1S1Q96B36 256 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 HEPHQ9BQS7 1158 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SLC6A15Q9H2J7 730 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 VTA1Q9NP79 307 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 NYAP2Q9P242 653 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PSMC3IPQ9P2W1 217 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 VANGL2Q9ULK5 521 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SALL1Q9NSC2 1324 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ISPDA4D126 451 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PP2D1A8MPX8 630 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 MAGEB3O15480 346 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 EPB42P16452 691 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 KLRK1P26718 216 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PIK3R1P27986 724 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SERPINB5P36952 375 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PRCPP42785 496 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ACOT2P49753 483 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 THOP1P52888 689 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 GEMIN4P57678 1058 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 HSF2Q03933 536 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 CHI3L2Q15782 390 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 AFTPHQ6ULP2 937 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 TMC7Q7Z402 723 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 HAUS6Q7Z4H7 955 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 AMIGO2Q86SJ2 522 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PALB2Q86YC2 1186 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PROM2Q8N271 834 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SYNPOQ8N3V7 929 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 BARHL2Q9NY43 387 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 VTI1BQ9UEU0 232 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PCDHGA4Q9Y5G9 962 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 MIF4GDA9UHW6 222 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PTGES3LE9PB15 166 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 MUSKO15146 869 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SSNA1O43805 119 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PARNO95453 639 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 CETPP11597 493 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 FUT4P22083 530 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 RRM1P23921 792 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ATP12AP54707 1039 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 IL18R1Q13478 541 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 DGCR6Q14129 220 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 NFIL3Q16649 462 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PAN2Q504Q3 1202 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 PAGE2BQ5JRK9 111 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 GNASQ5JWF2 1037 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ANO7Q6IWH7 933 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 KLHDC10Q6PID8 442 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 RNF180Q86T96 592 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 AENQ8WTP8 325 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ANKRD49Q8WVL7 239 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 C1orf54Q8WWF1 131 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 C9orf72Q96LT7 481 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 C7orf25Q9BPX7 421 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 FAM118BQ9BPY3 351 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 AIFM2Q9BRQ8 373 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 NALCNQ8IZF0 1738 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 FAM92AA1XBS5 289 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 H3BM21 787 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 DNM1LO00429 736 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ZNF263O14978 683 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 KCNN4O15554 427 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 NTRK1P04629 796 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ETFBP38117 255 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 AP3M2P53677 418 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 EIF3EP60228 445 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SEL1L3Q68CR1 1132 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 EIF3MQ7L2H7 374 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 NET1Q7Z628 596 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 GALNT12Q8IXK2 581 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 SPERTQ8NA61 448 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 FIG4Q92562 907 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 HNRNPABQ99729 332 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 DEFB129Q9H1M3 183 aa7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 ZNF624Q9P2J8 865 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-210ENST00000533089 UVRAGQ9P2Y5 699 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms