RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TTC17Q96AE7 1141 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 SLC39A13Q96H72 371 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 MRGPRX3Q96LB0 322 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 SERPINB11Q96P15 392 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 IRX2Q9BZI1 471 aaPredicted RBP17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 ST7Q9NRC1 585 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 TOR4AQ9NXH8 423 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 SERGEFQ9UGK8 458 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 SUN2Q9UH99 717 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 BTBD3Q9Y2F9 522 aa17.72■□□□□ 0.43
RPUSD4-207ENST00000532800 LAMA5O15230 3695 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 CACNA1GO43497 2377 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 BIN1O00499 593 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 KCNK3O14649 394 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 SIN3BO75182 1162 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 CTSOP43234 321 aaPredicted RBP17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 RPL34P49207 117 aaKnown RBP17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 SCAPQ12770 1279 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 KCNH2Q12809 1159 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 MS4A13Q5J8X5 152 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 KCNT1Q5JUK3 1230 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 SYPL2Q5VXT5 272 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 DBX2Q6ZNG2 339 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 TRIM59Q8IWR1 403 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 DHX40Q8IX18 779 aaKnown RBP17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 EHBP1Q8NDI1 1231 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 ORAI3Q9BRQ5 295 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 INTS2Q9H0H0 1204 aaKnown RBP17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 RSPH9Q9H1X1 276 aaPredicted RBP17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 ANKRD6Q9Y2G4 727 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 PCDHGB2Q9Y5G2 931 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 ANKRD11Q6UB99 2663 aaPredicted RBP17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 NBEAQ8NFP9 2946 aa17.71■□□□□ 0.43
RPUSD4-207ENST00000532800 TYW5A2RUC4 315 aaKnown RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 FAM47DPA6NHR8 397 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 FLRT2O43155 660 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 IGHV4-34P06331 123 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 ATXN1LP0C7T5 689 aaKnown RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 KRT5P13647 590 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 HOXB3P14651 431 aaPredicted RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 CD27P26842 260 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 PPP1R2P41236 205 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 GRIA4P48058 902 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 NUMBP49757 651 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 ST8SIA6P61647 398 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 NNTQ13423 1086 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 CDH18Q13634 790 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 MORC3Q14149 939 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 TEAD4Q15561 434 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 HNRNPA1L2Q32P51 320 aaKnown RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 DCAF6Q58WW2 860 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 PITRM1Q5JRX3 1037 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 CCNI2Q6ZMN8 369 aaPredicted RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 PROSER1Q86XN7 944 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 ZNF557Q8N988 423 aaPredicted RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 RHBDD1Q8TEB9 315 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 GANCQ8TET4 914 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 DDX50Q9BQ39 737 aaKnown RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 PABPC3Q9H361 631 aaKnown RBP17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 SGK2Q9HBY8 427 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 OSGEPQ9NPF4 335 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 ACP6Q9NPH0 428 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 CYTH4Q9UIA0 394 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 CNTN6Q9UQ52 1028 aa17.7■□□□□ 0.42
RPUSD4-207ENST00000532800 GOLGA8CPA6NN73 597 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 TTC34A8MYJ7 566 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 E5RJQ4 531 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 H0Y8X5 98 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 MID1O15344 667 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 PAPSS1O43252 624 aaPredicted RBP17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 LUC7L3O95232 432 aaKnown RBP17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 AFPP02771 609 aaKnown RBP17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 ASLP04424 464 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 PITX1P78337 314 aaPredicted RBP17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 NUCB2P80303 420 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 RAP1GAP2Q684P5 730 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 KIAA0895LQ68EN5 471 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 ELOA2Q8IYF1 753 aaPredicted RBP17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 LGI2Q8N0V4 545 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 FBXL12Q9NXK8 326 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 TJP2Q9UDY2 1190 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 ERVW-1Q9UQF0 538 aa17.69■□□□□ 0.42
RPUSD4-207ENST00000532800 A0A1W2PP55 124 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 BICDL2A1A5D9 508 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 SART1O43290 800 aaKnown RBP17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 LETM1O95202 739 aaPredicted RBP17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 MARSP56192 900 aaKnown RBP17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 IL9RQ01113 521 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 PAK1Q13153 545 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 ITPR1Q14643 2758 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 CST6Q15828 149 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 ZC3H12AQ5D1E8 599 aaKnown RBP17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 C9orf64Q5T6V5 341 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 NCEH1Q6PIU2 408 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 FOXR2Q6PJQ5 311 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 USP30Q70CQ3 517 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 CHSY1Q86X52 802 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 MARCH9Q86YJ5 346 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms