RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 XRCC4Q13426 336 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 HNRNPLLQ8WVV9 542 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 SGF29Q96ES7 293 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 SPACA7Q96KW9 195 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 ILKAPQ9H0C8 392 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 NDOR1Q9UHB4 597 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 TRHDEQ9UKU6 1024 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 PFKMP08237 780 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 OR56A5P0C7T3 313 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 HSPA1AP0DMV8 641 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 HSPA1BP0DMV9 641 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 HTR1BP28222 390 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 SOAT1P35610 550 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 PMS1P54277 932 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 GRB14Q14449 540 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 ACAP1Q15027 740 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 CCNG2Q16589 344 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 GRAMD4Q6IC98 578 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 DENND1BQ6P3S1 775 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 GLT6D1Q7Z4J2 308 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 FAM35AQ86V20 835 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 STX19Q8N4C7 294 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 HES6Q96HZ4 224 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 RBBP8Q99708 897 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 DEC1Q9P2X7 70 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 OR12D3Q9UGF7 316 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 PCDHB9Q9Y5E1 797 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 B2RBV5 119 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 SYN3O14994 580 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 VSTM1Q6UX27 236 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 PRPF39Q86UA1 669 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 THTPAQ9BU02 230 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 OSBPL1AQ9BXW6 950 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 IARS2Q9NSE4 1012 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 GTF2IRD1Q9UHL9 959 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 NDRG2Q9UN36 371 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 TDRKHQ9Y2W6 561 aaKnown RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF142P52746 1687 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-221ENST00000532331 PJA2O43164 708 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 TSPAN1O60635 241 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 SPATA31C1P0DKV0 1188 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 DMC1Q14565 340 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 C11orf63Q6NUN7 778 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 NAT16Q8N8M0 369 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 NPLOC4Q8TAT6 608 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 OR8D1Q8WZ84 308 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 MCRS1Q96EZ8 462 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 OSGEPQ9NPF4 335 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 COL20A1Q9P218 1284 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 VAV3Q9UKW4 847 aa11.55□□□□□ -0.56
PTPRK-221ENST00000532331 MYO1GB0I1T2 1018 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 TBC1D4O60343 1298 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF7P17097 686 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 NR2C2P49116 596 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 DLG4P78352 724 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 TRIM60Q495X7 471 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CBWD6Q4V339 395 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CBWD3Q5JTY5 395 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CBWD5Q5RIA9 395 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF618Q5T7W0 954 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 PAPD7Q5XG87 772 aaKnown RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 MON1AQ86VX9 555 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CLEC4FQ8N1N0 589 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 FAR2Q96K12 515 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 FAM111AQ96PZ2 611 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 SYTL2Q9HCH5 934 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ARHGAP20Q9P2F6 1191 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 A8MX80 341 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 TRDMT1O14717 391 aaKnown RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 HLA-DPA1P20036 260 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 C16orf87Q6PH81 154 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 NLRP9Q7RTR0 991 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 PTAR1Q7Z6K3 402 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 C3orf20Q8ND61 904 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ZFP42Q96MM3 310 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ZYG11BQ9C0D3 744 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 GOLGA2P5Q9HBQ8 144 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 HNRNPRO43390 633 aaKnown RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 SUPT7LO94864 414 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 AMD1P17707 334 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 FAM124AQ86V42 546 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 SERAC1Q96JX3 654 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ADNPQ9H2P0 1102 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 RUVBL2Q9Y230 463 aaKnown RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 EIF3LQ9Y262 564 aaKnown RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 AKAP12Q02952 1782 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ARL5CA6NH57 179 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 FAM107AO95990 144 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CASP5P51878 434 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 SKOR1P84550 965 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 PPP3CAQ08209 521 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 INSCQ1MX18 579 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 POM121L1PQ3SYA9 428 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms