RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 P2RY11Q96G91 374 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 MAGEB18Q96M61 343 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 TTPALQ9BTX7 342 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 ADAM33Q9BZ11 813 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 HIPK3Q9H422 1215 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 SAMD15Q9P1V8 674 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
CHD7-211ENST00000532149 NLRC5Q86WI3 1866 aa12.63□□□□□ -0.39
CHD7-211ENST00000532149 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 TMEM120BA0PK00 339 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 SMIM23A6NLE4 172 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 KCNU1A8MYU2 1149 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 RNF103O00237 685 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 ANXA9O76027 345 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 KIAA0754O94854 1291 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 GALTP07902 379 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 GARSP41250 739 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 ELK3P41970 407 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 SLCO1A2P46721 670 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 NDST2P52849 883 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 MLLT6P55198 1093 aaPredicted RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 SPARCL1Q14515 664 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 SEPT7Q16181 437 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 TEX44Q53QW1 395 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 FNBP1LQ5T0N5 605 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 ANKRD22Q5VYY1 191 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 FUT10Q6P4F1 479 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 KLHDC10Q6PID8 442 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 HFE2Q6ZVN8 426 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 TAC4Q86UU9 113 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 TRIM42Q8IWZ5 723 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 KLHDC8BQ8IXV7 354 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 ZNF473Q8WTR7 871 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 AZIN2Q96A70 460 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 KCTD12Q96CX2 325 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 BTN2A3PQ96KV6 586 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 UBE2OQ9C0C9 1292 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 RNF208Q9H0X6 261 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 KCNK9Q9NPC2 374 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 PPANQ9NQ55 473 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 TMLHEQ9NVH6 421 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 SSX2IPQ9Y2D8 614 aa12.62□□□□□ -0.39
CHD7-211ENST00000532149 HBS1LQ9Y450 684 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.62□□□□□ -0.39
CHD7-211ENST00000532149 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 I3L4J1 428 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 MFSD11O43934 449 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 ALDH1A2O94788 518 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 LRIG2O94898 1065 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 POLBP06746 335 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 SNRPAP09012 282 aaKnown RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 HAPLN1P10915 354 aaPredicted RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 CCL5P13501 91 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 PGAM1P18669 254 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 HADHAP40939 763 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 ATXN1P54253 815 aaKnown RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 HNRNPH2P55795 449 aaKnown RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 GPX6P59796 221 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 ITIH4Q14624 930 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 TRIP4Q15650 581 aaPredicted RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 PAN2Q504Q3 1202 aaKnown RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 RAB6CQ53S08 254 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 STXBP5Q5T5C0 1151 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 TTC39BQ5VTQ0 682 aaPredicted RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 SNX30Q5VWJ9 437 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 STEAP4Q687X5 459 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 SLC8B1Q6J4K2 584 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 PID1Q7Z2X4 250 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 SCN4BQ8IWT1 228 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 CACNA2D3Q8IZS8 1091 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 GBP7Q8N8V2 638 aaPredicted RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 CCDC110Q8TBZ0 833 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 ACMSDQ8TDX5 336 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 FBF1Q8TES7 1133 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 CKAP2Q8WWK9 683 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 DEFB118Q96PH6 123 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 TTLL2Q9BWV7 592 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 OSBPL7Q9BZF2 842 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 RAB6CQ9H0N0 254 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 TRABDQ9H4I3 376 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 LRRC40Q9H9A6 602 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 MKS1Q9NXB0 559 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 ABI2Q9NYB9 513 aaPredicted RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 BFARQ9NZS9 450 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 KLHL8Q9P2G9 620 aaPredicted RBP12.61□□□□□ -0.39
CHD7-211ENST00000532149 PCDHA11Q9Y5I1 949 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 PLXNA3P51805 1871 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 TANC1Q9C0D5 1861 aa12.61□□□□□ -0.39
CHD7-211ENST00000532149 SYNJ2BP-COX16A0A087WUM0 186 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 TCRBV9S1A1TA0A576 114 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms