RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PRKRIP1Q9H875 184 aaPredicted RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 LIN7CQ9NUP9 197 aaKnown RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 TMLHEQ9NVH6 421 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 NSMCE4AQ9NXX6 385 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 EHD3Q9NZN3 535 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 DKK3Q9UBP4 350 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 SLC27A6Q9Y2P4 619 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 DOK2O60496 412 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 CYP21A2P08686 494 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 CSF1P09603 554 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 NHLRC4P0CG21 123 aaPredicted RBP4.87□□□□□ -1.63
USP47-211ENST00000531513 MYCLP12524 364 aaPredicted RBP4.87□□□□□ -1.63
USP47-211ENST00000531513 CPA1P15085 419 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 CERS1P27544 350 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 ABCD3P28288 659 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 HTR7P34969 479 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 PGM1P36871 562 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 CCT4P50991 539 aaKnown RBP4.87□□□□□ -1.63
USP47-211ENST00000531513 PDE6CP51160 858 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 GALNT2Q10471 571 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 PDCLQ13371 301 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 ERV3-1Q14264 604 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 CLCA4Q14CN2 919 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 ACOX1Q15067 660 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 SUPT20HL1Q3ZLR7 823 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 ZNF484Q5JVG2 852 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 ICE2Q659A1 982 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 SLC9A4Q6AI14 798 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 LRRC8DQ7L1W4 858 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 R3HCC1LQ7Z5L2 792 aaKnown RBP4.87□□□□□ -1.63
USP47-211ENST00000531513 CHD1LQ86WJ1 897 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 ABRAQ8N0Z2 381 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 FSTL5Q8N475 847 aaPredicted RBP4.87□□□□□ -1.63
USP47-211ENST00000531513 DENND1AQ8TEH3 1009 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 TBC1D22AQ8WUA7 517 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 WASF1Q92558 559 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 STAMQ92783 540 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 FAM136AQ96C01 138 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 MCRS1Q96EZ8 462 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 TIGD1Q96MW7 591 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 SH2D3AQ9BRG2 576 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 PAAF1Q9BRP4 392 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 CENPOQ9BU64 300 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 QTRT1Q9BXR0 403 aaKnown RBP4.87□□□□□ -1.63
USP47-211ENST00000531513 ACTRT3Q9BYD9 372 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 CCDC134Q9H6E4 229 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 ANKEF1Q9NU02 776 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 NKIRAS2Q9NYR9 191 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 SH3BP4Q9P0V3 963 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 BAG5Q9UL15 447 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 HSF4Q9ULV5 492 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 SSX2IPQ9Y2D8 614 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 KAT6BQ8WYB5 2073 aa4.87□□□□□ -1.63
USP47-211ENST00000531513 SLC38A8A6NNN8 435 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 SEPT4O43236 478 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 TIPRLO75663 272 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 YY1P25490 414 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 ADORA2AP29274 412 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 CD6P30203 668 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 HOXD12P35452 270 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 CCR9P51686 369 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 TIRAPP58753 221 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 DCTN1Q14203 1278 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 GPR68Q15743 365 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 P3H1Q32P28 736 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 TMEM196Q5HYL7 178 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 PLAC9Q5JTB6 97 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 CEP78Q5JTW2 689 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 SLC18B1Q6NT16 456 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 CEP85Q6P2H3 762 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 CCDC129Q6ZRS4 1044 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 PIK3AP1Q6ZUJ8 805 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 TMTC3Q6ZXV5 915 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 B4GALNT4Q76KP1 1039 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 ZNF551Q7Z340 670 aaPredicted RBP4.86□□□□□ -1.63
USP47-211ENST00000531513 NGEFQ8N5V2 710 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 LSMEM1Q8N8F7 131 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 C11orf44Q8N8P7 122 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 FSIP1Q8NA03 581 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 SLC22A17Q8WUG5 538 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 ATRIPQ8WXE1 791 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 REPS1Q96D71 796 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 APOPT1Q96IL0 206 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 C17orf80Q9BSJ5 609 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 FUZQ9BT04 418 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 CCDC68Q9H2F9 335 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 GHITMQ9H3K2 345 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 KRT84Q9NSB2 600 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 SERTAD4Q9NUC0 356 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 RIMKLBQ9ULI2 386 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 ZBTB1Q9Y2K1 713 aa4.86□□□□□ -1.63
USP47-211ENST00000531513 LOC105369274A0A096LPK9 316 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 LOC102723532A0A0G2JNH3 316 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 GXYLT2A0PJZ3 443 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 PPP6CO00743 305 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 CTIFO43310 598 aaKnown RBP4.85□□□□□ -1.63
USP47-211ENST00000531513 PLOD3O60568 738 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 WDR47O94967 919 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 CYP2D6P10635 497 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms