RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 FAM149AA5PLN7 773 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 C10orf142B7Z368 130 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 RNASEH1O60930 286 aaKnown RBP15.49■□□□□ 0.07
CAPN1-219ENST00000530495 SIN3BO75182 1162 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 LTFP02788 710 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 ASLP04424 464 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 CSKP41240 450 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 RGS7P49802 495 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 C21orf59P57076 290 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 TBX4P57082 545 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 ST8SIA6P61647 398 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 LRMPQ12912 555 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 INAVAQ3KP66 663 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 MFN1Q8IWA4 741 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 SCUBE3Q8IX30 993 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 HJURPQ8NCD3 748 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-219ENST00000530495 GANCQ8TET4 914 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 CCDC34Q96HJ3 373 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 MRGPRX3Q96LB0 322 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 DDX50Q9BQ39 737 aaKnown RBP15.49■□□□□ 0.07
CAPN1-219ENST00000530495 ZSWIM1Q9BR11 485 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 NEUROG2Q9H2A3 272 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 RMND1Q9NWS8 449 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-219ENST00000530495 ADAMTS1Q9UHI8 967 aa15.49■□□□□ 0.07
CAPN1-219ENST00000530495 URB1O60287 2271 aaKnown RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 GOLGA4Q13439 2230 aaKnown RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 APC2O95996 2303 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 TARSL2A2RTX5 802 aaKnown RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 FAM47DPA6NHR8 397 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 E9PAM4 449 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 RNF225M0QZC1 329 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 PIK3R2O00459 728 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 FYNP06241 537 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 IL9RQ01113 521 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 CST6Q15828 149 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 C9orf64Q5T6V5 341 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 ZNF658Q5TYW1 1059 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 NCEH1Q6PIU2 408 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 TMEM270Q6UE05 265 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 DHRS13Q6UX07 377 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 TMPRSS12Q86WS5 348 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 CLEC4CQ8WTT0 213 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 SKA1Q96BD8 255 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 MYEOVQ96EZ4 313 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 LRIG1Q96JA1 1093 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 FCRL2Q96LA5 508 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 HSFY1Q96LI6 401 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 PRICKLE1Q96MT3 831 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 GSDMAQ96QA5 445 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 ELF4Q99607 663 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-219ENST00000530495 TSG101Q99816 390 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 EBF2Q9HAK2 575 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 FTSJ1Q9UET6 329 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 SERGEFQ9UGK8 458 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 FZD4Q9ULV1 537 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 ERVW-1Q9UQF0 538 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 TLR6Q9Y2C9 796 aa15.48■□□□□ 0.07
CAPN1-219ENST00000530495 LRRC72A6NJI9 287 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 PMM2O15305 246 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 FBXO21O94952 628 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 WNT1P04628 370 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 SRPRAP08240 638 aaKnown RBP15.47■□□□□ 0.07
CAPN1-219ENST00000530495 CCR5P51681 352 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 PMS1P54277 932 aaKnown RBP15.47■□□□□ 0.07
CAPN1-219ENST00000530495 RPS24P62847 133 aaKnown RBP15.47■□□□□ 0.07
CAPN1-219ENST00000530495 PNOCQ13519 176 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 KCNJ12Q14500 433 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 STILQ15468 1287 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 CCDC157Q569K6 752 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 FSCBQ5H9T9 825 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 MS4A13Q5J8X5 152 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 PITRM1Q5JRX3 1037 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 PRAMEF14Q5SWL7 426 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 MMAAQ8IVH4 418 aaKnown RBP15.47■□□□□ 0.07
CAPN1-219ENST00000530495 DHX40Q8IX18 779 aaKnown RBP15.47■□□□□ 0.07
CAPN1-219ENST00000530495 CARNMT1Q8N4J0 409 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 OR2T34Q8NGX1 318 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 SLC39A13Q96H72 371 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 SLC6A18Q96N87 628 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 FAM129BQ96TA1 746 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 OMDQ99983 421 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 PCDHB4Q9Y5E5 795 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 PCDHGA1Q9Y5H4 931 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 ATP6V1DQ9Y5K8 247 aa15.47■□□□□ 0.07
CAPN1-219ENST00000530495 ITIH6Q6UXX5 1313 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 LAMA5O15230 3695 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 A0A1W2PP55 124 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 TYW5A2RUC4 315 aaKnown RBP15.46■□□□□ 0.07
CAPN1-219ENST00000530495 TTC34A8MYJ7 566 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 MID1O15344 667 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 RNASEH2AO75792 299 aaKnown RBP15.46■□□□□ 0.07
CAPN1-219ENST00000530495 C1SP09871 688 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 CDK4P11802 303 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 CD38P28907 300 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 SLC8A1P32418 973 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 RPL34P49207 117 aaKnown RBP15.46■□□□□ 0.07
CAPN1-219ENST00000530495 FMO5P49326 533 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 LRRC63Q05C16 580 aa15.46■□□□□ 0.07
CAPN1-219ENST00000530495 NNTQ13423 1086 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms