RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 GJB7Q6PEY0 223 aa18.37■□□□□ 0.53
CMTM1-213ENST00000529506 C11orf57Q6ZUT1 292 aaPredicted RBP18.37■□□□□ 0.53
CMTM1-213ENST00000529506 PIP4P1Q86T03 277 aa18.37■□□□□ 0.53
CMTM1-213ENST00000529506 LGI2Q8N0V4 545 aa18.37■□□□□ 0.53
CMTM1-213ENST00000529506 ADAM32Q8TC27 787 aa18.37■□□□□ 0.53
CMTM1-213ENST00000529506 NDST4Q9H3R1 872 aa18.37■□□□□ 0.53
CMTM1-213ENST00000529506 SGK2Q9HBY8 427 aa18.37■□□□□ 0.53
CMTM1-213ENST00000529506 DNAJC12Q9UKB3 198 aa18.37■□□□□ 0.53
CMTM1-213ENST00000529506 TARSL2A2RTX5 802 aaKnown RBP18.36■□□□□ 0.53
CMTM1-213ENST00000529506 KCNU1A8MYU2 1149 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 F5H5T6 163 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 HSF2BPO75031 334 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 TRIM16O95361 564 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 TACR2P21452 398 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 LAMA1P25391 3075 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 CSKP41240 450 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 RPS14P62263 151 aaKnown RBP18.36■□□□□ 0.53
CMTM1-213ENST00000529506 ARID5BQ14865 1188 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 TTC39BQ5VTQ0 682 aaPredicted RBP18.36■□□□□ 0.53
CMTM1-213ENST00000529506 RNF219Q5W0B1 726 aaPredicted RBP18.36■□□□□ 0.53
CMTM1-213ENST00000529506 ZNF776Q68DI1 518 aaPredicted RBP18.36■□□□□ 0.53
CMTM1-213ENST00000529506 CHSY1Q86X52 802 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 ZDHHC17Q8IUH5 632 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
CMTM1-213ENST00000529506 PDCL3Q9H2J4 239 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 SYNCQ9H7C4 482 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 FAM204AQ9H8W3 233 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 CYTH4Q9UIA0 394 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 PCDHB9Q9Y5E1 797 aa18.36■□□□□ 0.53
CMTM1-213ENST00000529506 FOXN3O00409 490 aaPredicted RBP18.35■□□□□ 0.53
CMTM1-213ENST00000529506 IGLV3-25P01717 112 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 SULT2A1Q06520 285 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 FOXC1Q12948 553 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 ST3GAL2Q16842 350 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 HNRNPA1L2Q32P51 320 aaKnown RBP18.35■□□□□ 0.53
CMTM1-213ENST00000529506 RABGAP1LQ5R372 815 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 OR6B2Q6IFH4 312 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 LRSAM1Q6UWE0 723 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 USP30Q70CQ3 517 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 FAM124AQ86V42 546 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 DEFB106AQ8N104 65 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 CFAP52Q8N1V2 620 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 WDTC1Q8N5D0 677 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 WFDC5Q8TCV5 224 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 LMLNQ96KR4 655 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 TUBGCP2Q9BSJ2 902 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 RSPH9Q9H1X1 276 aaPredicted RBP18.35■□□□□ 0.53
CMTM1-213ENST00000529506 ACP6Q9NPH0 428 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 DDIT4Q9NX09 232 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 RRN3Q9NYV6 651 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 EIF2B4Q9UI10 523 aaKnown RBP18.35■□□□□ 0.53
CMTM1-213ENST00000529506 KNL1Q8NG31 2342 aa18.35■□□□□ 0.53
CMTM1-213ENST00000529506 SEMA4FO95754 770 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 CER1O95813 267 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 ECT2LQ008S8 904 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 SLC6A3Q01959 620 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 EIF4EBP2Q13542 120 aaPredicted RBP18.34■□□□□ 0.53
CMTM1-213ENST00000529506 TEAD4Q15561 434 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 PITRM1Q5JRX3 1037 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 RAP1GAP2Q684P5 730 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 CACUL1Q86Y37 369 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 ZCCHC9Q8N567 271 aaKnown RBP18.34■□□□□ 0.53
CMTM1-213ENST00000529506 ZNF366Q8N895 744 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 C1orf131Q8NDD1 294 aaKnown RBP18.34■□□□□ 0.53
CMTM1-213ENST00000529506 GANCQ8TET4 914 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 PRICKLE1Q96MT3 831 aaPredicted RBP18.34■□□□□ 0.53
CMTM1-213ENST00000529506 SLC2A13Q96QE2 648 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 CPXM1Q96SM3 734 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 NUP62CLQ9H1M0 184 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 OSGEPQ9NPF4 335 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 FSCN3Q9NQT6 498 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 ERVW-1Q9UQF0 538 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
CMTM1-213ENST00000529506 MAP1BP46821 2468 aaKnown RBP18.34■□□□□ 0.53
CMTM1-213ENST00000529506 EDDM13A0A1B0GTR0 161 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 PES1O00541 588 aaKnown RBP18.33■□□□□ 0.52
CMTM1-213ENST00000529506 ZNF883P0CG24 379 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 CD59P13987 128 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 ACSL1P33121 698 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 NOS2P35228 1153 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 CLCN1P35523 988 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 MATKP42679 507 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 AFF3P51826 1226 aaKnown RBP18.33■□□□□ 0.52
CMTM1-213ENST00000529506 SIM1P81133 766 aaPredicted RBP18.33■□□□□ 0.52
CMTM1-213ENST00000529506 GRIK2Q13002 908 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 SUZ12Q15022 739 aaKnown RBP18.33■□□□□ 0.52
CMTM1-213ENST00000529506 ACBD5Q5T8D3 534 aaPredicted RBP18.33■□□□□ 0.52
CMTM1-213ENST00000529506 FAM71AQ8IYT1 594 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 TMEM35BQ8NCS4 154 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 SIX2Q9NPC8 291 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 INTS6Q9UL03 887 aaKnown RBP18.33■□□□□ 0.52
CMTM1-213ENST00000529506 PCDH15Q96QU1 1955 aa18.33■□□□□ 0.52
CMTM1-213ENST00000529506 A0A1B0GVM2 712 aa18.32■□□□□ 0.52
CMTM1-213ENST00000529506 TCAF2A6NFQ2 919 aa18.32■□□□□ 0.52
CMTM1-213ENST00000529506 GJB3O75712 270 aa18.32■□□□□ 0.52
CMTM1-213ENST00000529506 F9P00740 461 aa18.32■□□□□ 0.52
CMTM1-213ENST00000529506 TPM2P07951 284 aa18.32■□□□□ 0.52
CMTM1-213ENST00000529506 EEF1GP26641 437 aaKnown RBP18.32■□□□□ 0.52
CMTM1-213ENST00000529506 PLK1P53350 603 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms