RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MED13LQ71F56 2210 aa8.9□□□□□ -0.98
SSBP3-212ENST00000528930 P4HA2O15460 535 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 CKMP06732 381 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 FAM200BP0CF97 657 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 PTMSP20962 102 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 SRSF11Q05519 484 aaKnown RBP8.89□□□□□ -0.99
SSBP3-212ENST00000528930 IFRD2Q12894 506 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-212ENST00000528930 LRMPQ12912 555 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 RUNX3Q13761 415 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 MTF1Q14872 753 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 TBC1D25Q3MII6 688 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 XP32Q5T750 250 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 ARHGAP17Q68EM7 881 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 GPRIN1Q7Z2K8 1008 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 IRF2BP1Q8IU81 584 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 TICAM1Q8IUC6 712 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 TTC39CQ8N584 583 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 MLKLQ8NB16 471 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 GPT2Q8TD30 523 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 SH3RF2Q8TEC5 729 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 SETD7Q8WTS6 366 aaKnown RBP8.89□□□□□ -0.99
SSBP3-212ENST00000528930 FBXO32Q969P5 355 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 HEXIM2Q96MH2 286 aaKnown RBP8.89□□□□□ -0.99
SSBP3-212ENST00000528930 SLITRK1Q96PX8 696 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 DUSP16Q9BY84 665 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 EBF3Q9H4W6 596 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 PRDM16Q9HAZ2 1276 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 THG1LQ9NWX6 298 aaKnown RBP8.89□□□□□ -0.99
SSBP3-212ENST00000528930 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 MYH10P35580 1976 aa8.89□□□□□ -0.99
SSBP3-212ENST00000528930 CSMD1Q96PZ7 3565 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 OTOGQ6ZRI0 2925 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 CENPEQ02224 2701 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 LEFTY2O00292 366 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 FLRT2O43155 660 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 ABL1P00519 1130 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 ARSAP15289 507 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 RHOQP17081 205 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 TRIM21P19474 475 aaKnown RBP8.88□□□□□ -0.99
SSBP3-212ENST00000528930 ACO1P21399 889 aaKnown RBP8.88□□□□□ -0.99
SSBP3-212ENST00000528930 TNFRSF8P28908 595 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 PDE6CP51160 858 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 KIF11P52732 1056 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 NFKB2Q00653 900 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 GRIK2Q13002 908 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 EML3Q32P44 896 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 DHRS13Q6UX07 377 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 TTC30AQ86WT1 665 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 FAM26EQ8N5C1 309 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 PDZD8Q8NEN9 1154 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 OSCP1Q8WVF1 389 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 KAT5Q92993 513 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 LGMNQ99538 433 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 ZDHHC5Q9C0B5 715 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 NUP62CLQ9H1M0 184 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 LINC00597Q9H2U6 94 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 PNPLA8Q9NP80 782 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 OSER1Q9NX31 292 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 GMIPQ9P107 970 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 PLEKHB1Q9UF11 243 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-212ENST00000528930 CPQQ9Y646 472 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 WNT6Q9Y6F9 365 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 USP3Q9Y6I4 520 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 KNL1Q8NG31 2342 aa8.88□□□□□ -0.99
SSBP3-212ENST00000528930 AP5Z1O43299 807 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 COCHO43405 550 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 BRINP1O60477 761 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 FGFR1OPO95684 399 aaKnown RBP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 TPM2P07951 284 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 MBL2P11226 248 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 HNRNPLP14866 589 aaKnown RBP eCLIP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 TBXAS1P24557 533 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 GJA4P35212 333 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 ACTN2P35609 894 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 TUBP50607 506 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 GALK1P51570 392 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 TLE1Q04724 770 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 VAC14Q08AM6 782 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 PDGFRLQ15198 375 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 CRY1Q16526 586 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 DPCR1Q3MIW9 517 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 PLA2G4EQ3MJ16 856 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 RAB41Q5JT25 222 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 HECTD3Q5T447 861 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 BROXQ5VW32 411 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 NAIF1Q69YI7 327 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 CC2D1AQ6P1N0 951 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 RRAGAQ7L523 313 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 ARHGEF19Q8IW93 802 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 KIAA1958Q8N8K9 716 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 EXD3Q8N9H8 876 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 ANKRD52Q8NB46 1076 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 ZNF248Q8NDW4 579 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 WBP2Q969T9 261 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 JAKMIP2Q96AA8 810 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 KREMEN1Q96MU8 473 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 NT5C1BQ96P26 610 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 GBP4Q96PP9 640 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 ZSWIM1Q9BR11 485 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms