RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 IRGQQ8WZA9 623 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 TFAP2BQ92481 460 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 WBP2Q969T9 261 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 FAM81BQ96LP2 452 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 CITED4Q96RK1 184 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 MED15Q96RN5 788 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ZSWIM1Q9BR11 485 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 DCLK3Q9C098 648 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 RASSF4Q9H2L5 321 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 CLSTN2Q9H4D0 955 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 CD248Q9HCU0 757 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ARHGEF4Q9NR80 690 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 WDR35Q9P2L0 1181 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 HESX1Q9UBX0 185 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 STOML2Q9UJZ1 356 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 FBXO10Q9UK96 956 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 SLC27A6Q9Y2P4 619 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 PCDHGA5Q9Y5G8 931 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.39□□□□□ -1.235e-6■■■■■ 39.1
ITGB1-218ENST00000528877 MUC22E2RYF6 1773 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 TULP2O00295 520 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 GFRA2O00451 464 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SCAMP3O14828 347 aaKnown RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 EIF4EBP3O60516 100 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 IGLV3-27P01718 113 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 KLKB1P03952 638 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 IRF1P10914 325 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 TYRP14679 529 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 CD19P15391 556 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SDHBP21912 280 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 HOXC13P31276 330 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 ID4P47928 161 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 DAOAP59103 153 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 ZNF445P59923 1031 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 KDSRQ06136 332 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 ADIGQ0VDE8 80 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SRSF5Q13243 272 aaKnown RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 CNGA2Q16280 664 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 CSRP2Q16527 193 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 CT47A1Q5JQC4 288 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 FYB2Q5VWT5 728 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 BTBD8Q5XKL5 378 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 TRIM65Q6PJ69 517 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 TMEM270Q6UE05 265 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SHISA2Q6UWI4 295 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 BEND5Q7L4P6 421 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 CACNA2D4Q7Z3S7 1137 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 MIB1Q86YT6 1006 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 IRF2BP1Q8IU81 584 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 ARHGEF19Q8IW93 802 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SFTPA1Q8IWL2 248 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 KIAA2013Q8IYS2 634 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 PPM1KQ8N3J5 372 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 CPXM2Q8N436 756 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 DCLK2Q8N568 766 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 RBBP8NLQ8NC74 664 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 MDGA1Q8NFP4 955 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 TSTD1Q8NFU3 115 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 OLIG1Q8TAK6 271 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SLC35F5Q8WV83 523 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 KAT5Q92993 513 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 RMDN1Q96DB5 314 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 HSFY1Q96LI6 401 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 KREMEN1Q96MU8 473 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 XPO6Q96QU8 1125 aaKnown RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 HHIPQ96QV1 700 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SRRTQ9BXP5 876 aaKnown RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 ULBP1Q9BZM6 244 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 ADAM19Q9H013 955 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 INTS2Q9H0H0 1204 aaKnown RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 THAP9Q9H5L6 903 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 PARD6AQ9NPB6 346 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 TPSG1Q9NRR2 321 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 MARCH2Q9P0N8 246 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 DEC1Q9P2X7 70 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 STRIP2Q9ULQ0 834 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 HBS1LQ9Y450 684 aaKnown RBP7.38□□□□□ -1.23
ITGB1-218ENST00000528877 MYH10P35580 1976 aa7.38□□□□□ -1.23
ITGB1-218ENST00000528877 SPAG17Q6Q759 2223 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 CEP295Q9C0D2 2601 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 YJEFN3A6XGL0 299 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 E7ENQ6 273 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 M0QYV0 167 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SGK1O00141 431 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 NPC1O15118 1278 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 MDM4O15151 490 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SART1O43290 800 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 FBXO21O94952 628 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 KLF8O95600 359 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 HNRNPLP14866 589 aaKnown RBP eCLIP7.37□□□□□ -1.231e-6■■□□□ 13.6
ITGB1-218ENST00000528877 ERCC5P28715 1186 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 CORO1AP31146 461 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 CHKAP35790 457 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 ANP32AP39687 249 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SLC6A11P48066 632 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 STX17P56962 302 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 RING1Q06587 406 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 EFEMP1Q12805 493 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms