RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SLC5A2P31639 672 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 TCEAL1Q15170 157 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 CDHR3Q6ZTQ4 885 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 CLVS1Q8IUQ0 354 aaPredicted RBP18.32■□□□□ 0.52
LTBP3-210ENST00000528516 APPL2Q8NEU8 664 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 TSPAN14Q8NG11 270 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 PPP1R14BQ96C90 147 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 LRP5O75197 1615 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
LTBP3-210ENST00000528516 LACTBL1A8MY62 500 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 ADSSP30520 456 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 TMEM132BQ14DG7 1078 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 MPZL3Q6UWV2 235 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 METTL23Q86XA0 190 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 UNC45BQ8IWX7 931 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 SERPINI1Q99574 410 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 B3GNT5Q9BYG0 378 aa18.32■□□□□ 0.52
LTBP3-210ENST00000528516 TAF5Q15542 800 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 HSDL1Q3SXM5 330 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 SLITRK1Q96PX8 696 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 CPSF3Q9UKF6 684 aaKnown RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 ARHGAP26Q9UNA1 814 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 CAPN14A8MX76 684 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 CD48P09326 243 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 RPL22P35268 128 aaKnown RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 EIF2B2P49770 351 aaKnown RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 YWHAHQ04917 246 aaPredicted RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 ZACNQ401N2 412 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 PDPK2PQ6A1A2 396 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 ARMCX6Q7L4S7 300 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 GABPB2Q8TAK5 448 aaPredicted RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 TMEM176AQ96HP8 235 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 ZDHHC7Q9NXF8 308 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 SMIM18P0DKX4 95 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 CCDC80Q76M96 950 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 SLC26A11Q86WA9 606 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 DIS3LQ8TF46 1054 aaKnown RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 USP13Q92995 863 aaPredicted RBP18.31■□□□□ 0.52
LTBP3-210ENST00000528516 CHST12Q9NRB3 414 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 UBAP1Q9NZ09 502 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 EPS15L1Q9UBC2 864 aa18.31■□□□□ 0.52
LTBP3-210ENST00000528516 RNF103-CHMP3A0A140T963 221 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 PDAP1Q13442 181 aaKnown RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 DDIASQ8IXT1 998 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 HELQQ8TDG4 1101 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CPT1BQ92523 772 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 MAF1Q9H063 256 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 AVENQ9NQS1 362 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 TJP2Q9UDY2 1190 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 ANKRD12Q6UB98 2062 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 TCRBV7S3A2A0A539 114 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 EEF2KO00418 725 aaKnown RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 NOMO3P69849 1222 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CAPSQ13938 189 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 GRM2Q14416 872 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CROCCP3Q8IVE0 287 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 KIAA0319LQ8IZA0 1049 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 DDHD1Q8NEL9 900 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 NDRG1Q92597 394 aaKnown RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 VPS39Q96JC1 886 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 PCDHGB4Q9UN71 923 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 PCDHGB5Q9Y5G0 923 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 LSM1O15116 133 aaKnown RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 JCHAINP01591 159 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 F7P08709 466 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 PKNOX1P55347 436 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 TXNRD3NBQ6F5E7 133 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CCDC117Q8IWD4 279 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 PLEKHO2Q8TD55 490 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 SPATC1LQ9H0A9 340 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 BCAP29Q9UHQ4 241 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 UBIAD1Q9Y5Z9 338 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 HBP1O60381 514 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 GDF10P55107 478 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 ADGRG6Q86SQ4 1221 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CATSPER1Q8NEC5 780 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CASP10Q92851 521 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 C7orf26Q96N11 449 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CCDC106Q9BWC9 280 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 MAN1C1Q9NR34 630 aa18.3■□□□□ 0.52
LTBP3-210ENST00000528516 PRMT7Q9NVM4 692 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-210ENST00000528516 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 SNED1Q8TER0 1413 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 DNAJA2O60884 412 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 MAPTP10636 758 aaKnown RBP18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PLK1P53350 603 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 AP3M2P53677 418 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PHEXP78562 749 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 C1QBPQ07021 282 aaKnown RBP18.29■□□□□ 0.52
LTBP3-210ENST00000528516 TMTC4Q5T4D3 741 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 VWA5B1Q5TIE3 1220 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PLEKHA5Q9HAU0 1116 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 XPNPEP1Q9NQW7 623 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PRG3Q9Y2Y8 225 aaPredicted RBP18.29■□□□□ 0.52
LTBP3-210ENST00000528516 ARHGEF37A1IGU5 675 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 CBFA2T3O75081 653 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 MICAL2O94851 1124 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 ENDOD1O94919 500 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms