RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 FAM72BQ86X60 149 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 NPAS4Q8IUM7 802 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ZNF567Q8N184 647 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 SCAMP5Q8TAC9 235 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 MGARPQ8TDB4 240 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 MZB1Q8WU39 189 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 CDKL2Q92772 493 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TBC1D31Q96DN5 1066 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 STAMBPL1Q96FJ0 436 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 SPATA17Q96L03 361 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 KDM4CQ9H3R0 1056 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TMPRSS4Q9NRS4 437 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ABI2Q9NYB9 513 aaPredicted RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 CLIC5Q9NZA1 410 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 KLHL8Q9P2G9 620 aaPredicted RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TLR6Q9Y2C9 796 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 PRG3Q9Y2Y8 225 aaPredicted RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 MFHAS1Q9Y4C4 1052 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TTLL3Q9Y4R7 772 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FAM92AA1XBS5 289 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FAM159BA6NKW6 160 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 WASH4PA8MWX3 477 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TCP11X1B4DZS4 312 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 AVILO75366 819 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ALDH1A2O94788 518 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 PTPN3P26045 913 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 SLC18A2Q05940 514 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 GPR17Q13304 367 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 LRRC14Q15048 493 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 QPCTQ16769 361 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 HHATQ5VTY9 493 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FAM171A1Q5VUB5 890 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ARMC3Q5W041 872 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 UNC5AQ6ZN44 842 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ANKS3Q6ZW76 656 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 SCD5Q86SK9 330 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 PDCD7Q8N8D1 485 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 BANPQ8N9N5 519 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 CFAP36Q96G28 342 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ANLNQ9NQW6 1124 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 MAD1L1Q9Y6D9 718 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TTC3P53804 2025 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ZNF638Q14966 1978 aaKnown RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 MYO18AQ92614 2054 aaKnown RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 CARNS1A5YM72 827 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 KCNU1A8MYU2 1149 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 I6L893 689 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 SNX3O60493 162 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 B4GALT3O60512 393 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 AP2A1O95782 977 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 CXCL10P02778 98 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 PGAM1P18669 254 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 NPY2RP49146 381 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 KPNA1P52294 538 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 RPL10AP62906 217 aaKnown RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 IFT88Q13099 833 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 PDK4Q16654 411 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 TIGD7Q6NT04 549 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 VPS11Q9H270 941 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 ACTR5Q9H9F9 607 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 MOCS1Q9NZB8 636 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 BFARQ9NZS9 450 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 SEPT10Q9P0V9 454 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 DNAJB4Q9UDY4 337 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 OGDHLQ9ULD0 1010 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 USP15Q9Y4E8 981 aaPredicted RBP15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 TRIM17Q9Y577 477 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
ECHDC1-220ENST00000528402 A0A1W2PPM1 405 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 MYO1CO00159 1063 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 SPAG7O75391 227 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 PAGE1O75459 146 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 C1QAP02745 245 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 SRGAP2BP0DMP2 458 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 ALADP13716 330 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 YWHAQP27348 245 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 PSMB4P28070 264 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 MLLT6P55198 1093 aaPredicted RBP15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 WDR4P57081 412 aaKnown RBP15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 GPNMBQ14956 572 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 SPANXN3Q5MJ09 141 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 MANEALQ5VSG8 457 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 FUT10Q6P4F1 479 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 TIFABQ6ZNK6 161 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 LINC00523Q86TU6 105 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 CTAGE3PQ8IX95 158 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 C4orf33Q8N1A6 199 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 CRIPAKQ8N1N5 446 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 AGGF1Q8N302 714 aaeCLIP15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 ZNF276Q8N554 614 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 FATE1Q969F0 183 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 TEKT5Q96M29 485 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 TOX2Q96NM4 488 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 CDK5RAP1Q96SZ6 601 aaKnown RBP15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 ELAC2Q9BQ52 826 aaKnown RBP15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 GBA3Q9H227 469 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms