RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TBC1D3Q8IZP1 549 aaPredicted RBP6.53□□□□□ -1.36
PCF11-202ENST00000528336 SNRNP27Q8WVK2 155 aaKnown RBP6.53□□□□□ -1.36
PCF11-202ENST00000528336 CCT6BQ92526 530 aa6.53□□□□□ -1.36
PCF11-202ENST00000528336 PIGKQ92643 395 aa6.53□□□□□ -1.36
PCF11-202ENST00000528336 TRMT61AQ96FX7 289 aaKnown RBP6.53□□□□□ -1.36
PCF11-202ENST00000528336 GPR78Q96P69 363 aa6.53□□□□□ -1.36
PCF11-202ENST00000528336 TRIM2Q9C040 744 aa6.53□□□□□ -1.36
PCF11-202ENST00000528336 ELAC1Q9H777 363 aaKnown RBP6.53□□□□□ -1.36
PCF11-202ENST00000528336 PPCSQ9HAB8 311 aa6.53□□□□□ -1.36
PCF11-202ENST00000528336 AGO4Q9HCK5 861 aaKnown RBP6.53□□□□□ -1.36
PCF11-202ENST00000528336 SEPSECSQ9HD40 501 aaKnown RBP6.53□□□□□ -1.36
PCF11-202ENST00000528336 ERICH3Q5RHP9 1530 aa6.53□□□□□ -1.36
PCF11-202ENST00000528336 SNAPC4Q5SXM2 1469 aa6.53□□□□□ -1.36
PCF11-202ENST00000528336 SETD1BQ9UPS6 1966 aaKnown RBP6.52□□□□□ -1.37
PCF11-202ENST00000528336 VDRP11473 427 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 GRK5P34947 590 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 TAS2R50P59544 299 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 MTA1Q13330 715 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 EZH2Q15910 746 aaKnown RBP6.52□□□□□ -1.37
PCF11-202ENST00000528336 ALFQ53S48 1182 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 COLEC12Q5KU26 742 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 JMJD6Q6NYC1 403 aaPredicted RBP6.52□□□□□ -1.37
PCF11-202ENST00000528336 NFRKBQ6P4R8 1299 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 RAB11FIP2Q7L804 512 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 NEK8Q86SG6 692 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 LAS2Q8IYD9 372 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 STT3BQ8TCJ2 826 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 OTUD7AQ8TE49 926 aaPredicted RBP6.52□□□□□ -1.37
PCF11-202ENST00000528336 ASB12Q8WXK4 309 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 RUBCNQ92622 972 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 C3orf49Q96BT1 292 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 FCRL5Q96RD9 977 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 FAM118BQ9BPY3 351 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 PRDM8Q9NQV8 689 aa6.52□□□□□ -1.37
PCF11-202ENST00000528336 EFCAB8A8MWE9 144 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 INPPL1O15357 1258 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 LARGE1O95461 756 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 ATP5F1P24539 256 aaPredicted RBP6.51□□□□□ -1.37
PCF11-202ENST00000528336 ZNF84P51523 738 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 RBM6P78332 1123 aaKnown RBP6.51□□□□□ -1.37
PCF11-202ENST00000528336 GHRHRQ02643 423 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 DAZAP2Q15038 168 aaPredicted RBP6.51□□□□□ -1.37
PCF11-202ENST00000528336 TRIM60Q495X7 471 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 MEX3CQ5U5Q3 659 aaKnown RBP6.51□□□□□ -1.37
PCF11-202ENST00000528336 ANO1Q5XXA6 986 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 DHRS13Q6UX07 377 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 SRFBP1Q8NEF9 429 aaKnown RBP6.51□□□□□ -1.37
PCF11-202ENST00000528336 ZNF845Q96IR2 970 aaPredicted RBP6.51□□□□□ -1.37
PCF11-202ENST00000528336 TRAPPC9Q96Q05 1148 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 MLXIPLQ9NP71 852 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 NRIP3Q9NQ35 241 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 LIN7CQ9NUP9 197 aaKnown RBP6.51□□□□□ -1.37
PCF11-202ENST00000528336 PCDHA10Q9Y5I2 948 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 SYNJ2O15056 1496 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 PBRM1Q86U86 1689 aa6.51□□□□□ -1.37
PCF11-202ENST00000528336 RPGRIP1LQ68CZ1 1315 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 FHAD1B1AJZ9 1412 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 AGAP5A6NIR3 686 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 SLC38A8A6NNN8 435 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 IPO5O00410 1097 aaKnown RBP6.5□□□□□ -1.37
PCF11-202ENST00000528336 TP73O15350 636 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 PLAUP00749 431 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 ENO1P06733 434 aaKnown RBP6.5□□□□□ -1.37
PCF11-202ENST00000528336 ST6GAL1P15907 406 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 SLC37A1P57057 533 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 FOXO1Q12778 655 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 CCDC184Q52MB2 194 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 ZNF626Q68DY1 528 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 RFX6Q8HWS3 928 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 UEVLDQ8IX04 471 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 SMAP1Q8IYB5 467 aaPredicted RBP6.5□□□□□ -1.37
PCF11-202ENST00000528336 CLEC4CQ8WTT0 213 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 ABHD14AQ9BUJ0 271 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 TAF1DQ9H5J8 278 aaPredicted RBP6.5□□□□□ -1.37
PCF11-202ENST00000528336 LUZP4Q9P127 313 aa6.5□□□□□ -1.37
PCF11-202ENST00000528336 C19orf53Q9UNZ5 99 aaPredicted RBP6.5□□□□□ -1.37
PCF11-202ENST00000528336 ADAMTS12P58397 1594 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 CYP2D7A0A087X1C5 515 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 ALDOAP04075 364 aaKnown RBP6.49□□□□□ -1.37
PCF11-202ENST00000528336 CYP3A4P08684 503 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 FOXL2P58012 376 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 SHC2P98077 582 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 TLE3Q04726 772 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 STIM1Q13586 685 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 PRKG1Q13976 671 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 POSTNQ15063 836 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 ANXA2RQ3ZCQ2 193 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 GLE1Q53GS7 698 aaKnown RBP6.49□□□□□ -1.37
PCF11-202ENST00000528336 TANGO2Q6ICL3 276 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 SLC39A5Q6ZMH5 540 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 RBM44Q6ZP01 1051 aaKnown RBP6.49□□□□□ -1.37
PCF11-202ENST00000528336 RHPN2Q8IUC4 686 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 TRAPPC12Q8WVT3 735 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 CPT1BQ92523 772 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 SCNM1Q9BWG6 230 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 GATA5Q9BWX5 397 aaPredicted RBP6.49□□□□□ -1.37
PCF11-202ENST00000528336 PRSS22Q9GZN4 317 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 GTF2A1LQ9UNN4 478 aa6.49□□□□□ -1.37
PCF11-202ENST00000528336 MORC2Q9Y6X9 1032 aaPredicted RBP6.49□□□□□ -1.37
PCF11-202ENST00000528336 RUSC2Q8N2Y8 1516 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms