RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 NUDT18Q6ZVK8 323 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 PLPPR4Q7Z2D5 763 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 PHF13Q86YI8 300 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-218ENST00000528232 SHC3Q92529 594 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 GPR63Q9BZJ6 419 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 TAGLN3Q9UI15 199 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 DNPEPQ9ULA0 475 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 SKAP2O75563 359 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-218ENST00000528232 ALBP02768 609 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 THRAP10827 490 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 RALBP11234 206 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 SKIV2L2P42285 1042 aaKnown RBP7.38□□□□□ -1.23
CTNND1-218ENST00000528232 ST8SIA6P61647 398 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 RPL10AP62906 217 aaKnown RBP7.38□□□□□ -1.23
CTNND1-218ENST00000528232 TWF1Q12792 350 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 VGLL4Q14135 290 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 KHDRBS2Q5VWX1 349 aaKnown RBP7.38□□□□□ -1.23
CTNND1-218ENST00000528232 IQSEC1Q6DN90 963 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 LRRC74BQ6ZQY2 392 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 IRF2BP2Q7Z5L9 587 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 STRA8Q7Z7C7 330 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 SCUBE1Q8IWY4 988 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 SMARCD1Q96GM5 515 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 COX4I2Q96KJ9 171 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 MFSD14AQ96MC6 490 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 CDK5RAP1Q96SZ6 601 aaKnown RBP7.38□□□□□ -1.23
CTNND1-218ENST00000528232 FICDQ9BVA6 458 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 MOSPD1Q9UJG1 213 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 FBXO9Q9UK97 447 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-218ENST00000528232 VANGL2Q9ULK5 521 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 PCDHGB4Q9UN71 923 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 PCDHAC2Q9Y5I4 1007 aa7.38□□□□□ -1.23
CTNND1-218ENST00000528232 KDELR1P24390 212 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 AKT1P31749 480 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PTGS2P35354 604 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ELK3P41970 407 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 FMO1Q01740 532 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 STX5Q13190 355 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PCBP1Q15365 356 aaKnown RBP eCLIP7.37□□□□□ -1.234e-9■■■□□ 19
CTNND1-218ENST00000528232 TTMPQ5BVD1 217 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 UNC93AQ86WB7 457 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 SVOPQ8N4V2 548 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TRAPPC12Q8WVT3 735 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 HTR3CQ8WXA8 447 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 RPRD1AQ96P16 312 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TBCCD1Q9NVR7 557 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 HAO1Q9UJM8 370 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TRHDEQ9UKU6 1024 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PRG3Q9Y2Y8 225 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ADM5C9JUS6 153 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TRDMT1O14717 391 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 OPLAHO14841 1288 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 AKAP10O43572 662 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ALADP13716 330 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ATP6V1B1P15313 513 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 MIPP30301 263 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 AVPR1AP37288 418 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 NPY2RP49146 381 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PSEN2P49810 448 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ADIGQ0VDE8 80 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 XRCC4Q13426 336 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ATP1A4Q13733 1029 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 OASLQ15646 514 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TAF2Q6P1X5 1199 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 CCDC149Q6ZUS6 474 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PDPRQ8NCN5 879 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 DNAJB3Q8WWF6 145 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 SH3KBP1Q96B97 665 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 L3MBTL3Q96JM7 780 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ACO2Q99798 780 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 LRRC19Q9H756 370 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TMEM165Q9HC07 324 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ZSCAN32Q9NX65 697 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TRMT6Q9UJA5 497 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 REXO2Q9Y3B8 237 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TGFB1I1O43294 461 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 DDNO94850 711 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 MAP3K6O95382 1288 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TFRCP02786 760 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ZCCHC18P0CG32 403 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 TSHRP16473 764 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 BGNP21810 368 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 CCT3P49368 545 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ZNF846Q147U1 533 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ZNF280DQ6N043 979 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 CAPSLQ8WWF8 208 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 KAT5Q92993 513 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ELMO3Q96BJ8 720 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PDGFCQ9NRA1 345 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 CHST7Q9NS84 486 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 MYRFQ9Y2G1 1151 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ANKRD6Q9Y2G4 727 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 CENPXA8MT69 81 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PRPF4O43172 522 aaKnown RBP eCLIP7.37□□□□□ -1.234e-8■□□□□ 10.4
CTNND1-218ENST00000528232 USP1O94782 785 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 RBP1P09455 135 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ADSLP30566 484 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 ALDH7A1P49419 539 aaKnown RBP7.37□□□□□ -1.23
CTNND1-218ENST00000528232 PRKAA2P54646 552 aa7.37□□□□□ -1.23
CTNND1-218ENST00000528232 DRG2P55039 364 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms