RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TBC1D10AQ9BXI6 508 aa15.76■□□□□ 0.11
USH1C-207ENST00000527720 DDIT4Q9NX09 232 aa15.76■□□□□ 0.11
USH1C-207ENST00000527720 KLHL8Q9P2G9 620 aaPredicted RBP15.76■□□□□ 0.11
USH1C-207ENST00000527720 NLRC5Q86WI3 1866 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.75■□□□□ 0.11
USH1C-207ENST00000527720 FAM72CH0Y354 149 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 ZNF623O75123 536 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 GLRA3O75311 464 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 CHRNA1P02708 482 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 USP17L7P0C7H9 530 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 ODC1P11926 461 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 PTPN3P26045 913 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 CXCR3P49682 368 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 INHBEP58166 350 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 OCRLQ01968 901 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 MGAT3Q09327 533 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 BST1Q10588 318 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 TEX44Q53QW1 395 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 FAM72AQ5TYM5 149 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 PM20D1Q6GTS8 502 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 GDF6Q6KF10 455 aaPredicted RBP15.75■□□□□ 0.11
USH1C-207ENST00000527720 FAM72DQ6L9T8 149 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 FAM72BQ86X60 149 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 IFNL1Q8IU54 200 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 ATP2A3Q93084 1043 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 TBC1D31Q96DN5 1066 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 EPAS1Q99814 870 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 ACBD6Q9BR61 282 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 TRIM62Q9BVG3 475 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
USH1C-207ENST00000527720 EBF2Q9HAK2 575 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 SYBUQ9NX95 663 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 TRHDEQ9UKU6 1024 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 CCDC22O60826 627 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 SNNO75324 88 aaPredicted RBP15.75■□□□□ 0.11
USH1C-207ENST00000527720 AP2A1O95782 977 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 CYP11A1P05108 521 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 SCNN1GP51170 649 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 NKX3-2P78367 333 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 ZBTB16Q05516 673 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 INSCQ1MX18 579 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
USH1C-207ENST00000527720 BHLHA9Q7RTU4 235 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.75■□□□□ 0.11
USH1C-207ENST00000527720 LRRC40Q9H9A6 602 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 RRAGCQ9HB90 399 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 ZFYVE28Q9HCC9 887 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 CACNG4Q9UBN1 327 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 DCDC2Q9UHG0 476 aa15.75■□□□□ 0.11
USH1C-207ENST00000527720 FNDC1Q4ZHG4 1894 aaPredicted RBP15.74■□□□□ 0.11
USH1C-207ENST00000527720 A8MUI8 341 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 MYL2P10916 166 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 SERPINB3P29508 390 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CRADDP78560 199 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 ZNF33AQ06730 810 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 GALNT2Q10471 571 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 E2F5Q15329 346 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CHI3L2Q15782 390 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 ITPRIPL1Q6GPH6 555 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 FAM171BQ6P995 826 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 BEND5Q7L4P6 421 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 METTL23Q86XA0 190 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 TRPV1Q8NER1 839 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 ADAM32Q8TC27 787 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 SH3TC2Q8TF17 1288 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 LPPQ93052 612 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 PTCD3Q96EY7 689 aaKnown RBP15.74■□□□□ 0.11
USH1C-207ENST00000527720 NSL1Q96IY1 281 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CPNE1Q99829 537 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 SIKE1Q9BRV8 207 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 MECRQ9BV79 373 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CEP41Q9BYV8 373 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 WDCPQ9H6R7 721 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 SPC25Q9HBM1 224 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 XPNPEP3Q9NQH7 507 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 ANLNQ9NQW6 1124 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 TMEM30AQ9NV96 361 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 NOP53Q9NZM5 478 aaKnown RBP15.74■□□□□ 0.11
USH1C-207ENST00000527720 DSEQ9UL01 958 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 TIMM13Q9Y5L4 95 aaPredicted RBP15.74■□□□□ 0.11
USH1C-207ENST00000527720 NUMBLQ9Y6R0 609 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 ALDOAP04075 364 aaKnown RBP15.74■□□□□ 0.11
USH1C-207ENST00000527720 CYBAP13498 195 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CALB2P22676 271 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CYP2C18P33260 490 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 GARSP41250 739 aaKnown RBP15.74■□□□□ 0.11
USH1C-207ENST00000527720 AFF1P51825 1210 aaKnown RBP15.74■□□□□ 0.11
USH1C-207ENST00000527720 CACNA2D1P54289 1103 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 TIGD5Q53EQ6 642 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 LONP2Q86WA8 852 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 SMC1BQ8NDV3 1235 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 MYLPFQ96A32 169 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CERS2Q96G23 380 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 GBA3Q9H227 469 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 BFARQ9NZS9 450 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 ZFATQ9P243 1243 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 ADAM28Q9UKQ2 775 aa15.74■□□□□ 0.11
USH1C-207ENST00000527720 CASTOR2A6NHX0 329 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 F5H423 210 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms