RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 WSCD1Q658N2 575 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 LRRC74BQ6ZQY2 392 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 DENND5BQ6ZUT9 1274 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 PID1Q7Z2X4 250 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 C11orf74Q86VG3 221 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 SERPINB12Q96P63 405 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 DENND2DQ9H6A0 471 aaPredicted RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 KLHL8Q9P2G9 620 aaPredicted RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 ZC3H7BQ9UGR2 993 aaKnown RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 UBQLN1Q9UMX0 589 aaKnown RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 A0A1W2PPM1 405 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 HSPA1AP0DMV8 641 aaKnown RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 HSPA1BP0DMV9 641 aaKnown RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 ZNF252P-AS1Q0IIN9 211 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 CARTPTQ16568 116 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 LVRNQ6Q4G3 990 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 CES3Q6UWW8 571 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 RASSF3Q86WH2 238 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 ZNF560Q96MR9 790 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 RILPQ96NA2 401 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 C16orf70Q9BSU1 422 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 SNRNP25Q9BV90 132 aaKnown RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 NPHS2Q9NP85 383 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 TXLNGQ9NUQ3 528 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 UBP1Q9NZI7 540 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 FAM47DPA6NHR8 397 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 KCNK1O00180 336 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 ENO2P09104 434 aaPredicted RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 PAEPP09466 180 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 NUDT17P0C025 328 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 GM2AP17900 193 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 TCEA1P23193 301 aaKnown RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 ITKQ08881 620 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 CCDC153Q494R4 210 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 MROH9Q5TGP6 573 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 ZNF410Q86VK4 478 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP35-201ENST00000526425 ALLCQ8N6M5 410 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 EIF1ADQ8N9N8 165 aaKnown RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 DEPDC1BQ8WUY9 529 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 MAML1Q92585 1016 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 DACT3Q96B18 629 aaPredicted RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 PGM2Q96G03 612 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 ZNF333Q96JL9 665 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 TBC1D10AQ9BXI6 508 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 PLEKHA5Q9HAU0 1116 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 CYP3A43Q9HB55 503 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 HSFX1Q9UBD0 423 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 COL1A2P08123 1366 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 COL11A1P12107 1806 aaPredicted RBP10.13□□□□□ -0.79
USP35-201ENST00000526425 TCRBV7S3A2A0A539 114 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 ADCY6O43306 1168 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 MGEA5O60502 916 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 USP12O75317 370 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 TRUB2O95900 331 aaKnown RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 NCAM1P13591 858 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PORP16435 677 aaPredicted RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 NR4A1P22736 598 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 CD97P48960 835 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PTK7Q13308 1070 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 KPNB1Q14974 876 aaKnown RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 CA9Q16790 459 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 DCAF4L1Q3SXM0 396 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 ERMARDQ5T6L9 678 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 C17orf99Q6UX52 265 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PYROXD2Q8N2H3 581 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 SUN5Q8TC36 379 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 TNIP3Q96KP6 325 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 NSMCE3Q96MG7 304 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 TTC25Q96NG3 672 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 DCUN1D5Q9BTE7 237 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 ROPN1BQ9BZX4 212 aaPredicted RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 GRIP2Q9C0E4 1043 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PAIP1Q9H074 479 aaKnown RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 DCLRE1BQ9H816 532 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 ROPN1Q9HAT0 212 aaPredicted RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 SLCO1B3Q9NPD5 702 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 SMYD2Q9NRG4 433 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 TMPRSS4Q9NRS4 437 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PRG3Q9Y2Y8 225 aaPredicted RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 NOX1Q9Y5S8 564 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 GOLGA8TH3BQL2 631 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 OCM2P0CE71 109 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 OCMP0CE72 109 aaPredicted RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 TFE3P19532 575 aaPredicted RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 CYP2F1P24903 491 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 SP3Q02447 781 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 EMC10Q5UCC4 262 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 IYDQ6PHW0 289 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PGBD4Q96DM1 585 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 LRRC37BQ96QE4 947 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PAFAH2Q99487 392 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PCDH9Q9HC56 1237 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 ARL2BPQ9Y2Y0 163 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 TLL2Q9Y6L7 1015 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms