RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 UBE2J1Q9Y385 318 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-210ENST00000525878 A0A087WYN8 130 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 A0A1W2PPC4 97 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 GOLGA6CA6NDK9 693 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 GOLGA6BA6NDN3 693 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 RHPN2P1A8MT19 583 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 INAFM1C9JVW0 142 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 NPC1O15118 1278 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 VIPP01282 170 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 GOLGA6DP0CG33 693 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 PECAM1P16284 738 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-210ENST00000525878 TSHRP16473 764 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 PIK3CBP42338 1070 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 HMBOX1Q6NT76 420 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 CTU1Q7Z7A3 348 aaKnown RBP4.6□□□□□ -1.67
CSDE1-210ENST00000525878 NR2C2APQ86WQ0 139 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 ADGRF3Q8IZF5 1079 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 SNX27Q96L92 541 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 EIF3CQ99613 913 aaKnown RBP4.6□□□□□ -1.67
CSDE1-210ENST00000525878 COLEC11Q9BWP8 271 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 DCLK3Q9C098 648 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 RMI1Q9H9A7 625 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 GOLGA6AQ9NYA3 693 aa4.6□□□□□ -1.67
CSDE1-210ENST00000525878 BECN2A8MW95 431 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 RGS14O43566 566 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 LCATP04180 440 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 IGFBP2P18065 325 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 CBFBQ13951 182 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 ARHGAP15Q53QZ3 475 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 GFI1BQ5VTD9 330 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 FAM83HQ6ZRV2 1179 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-210ENST00000525878 BEND5Q7L4P6 421 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 SRFBP1Q8NEF9 429 aaKnown RBP4.59□□□□□ -1.67
CSDE1-210ENST00000525878 GRAMD1AQ96CP6 724 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 SEZ6LQ9BYH1 1024 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 ZNF556Q9HAH1 456 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 TXNRD2Q9NNW7 524 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 KRCC1Q9NPI7 259 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-210ENST00000525878 PRDM11Q9NQV5 511 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 DDX21Q9NR30 783 aaKnown RBP eCLIP4.59□□□□□ -1.67
CSDE1-210ENST00000525878 FBXO28Q9NVF7 368 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 SLC8A2Q9UPR5 921 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 PCDHB7Q9Y5E2 793 aa4.59□□□□□ -1.67
CSDE1-210ENST00000525878 A0A1B0GUV1 79 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 OR6C75A6NL08 312 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 SPRY3O43610 288 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 NEURL1O76050 574 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 CPA1P15085 419 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 ARSBP15848 533 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 RFX5P48382 616 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-210ENST00000525878 CASP5P51878 434 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 ABATP80404 500 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 TRAF1Q13077 416 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 SHBQ15464 509 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 CYB5R4Q7L1T6 521 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 CCDC150Q8NCX0 1101 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 MAGEH1Q9H213 219 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 FSCN3Q9NQT6 498 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 NCKIPSDQ9NZQ3 722 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 TBC1D14Q9P2M4 693 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 G3BP2Q9UN86 482 aaKnown RBP4.58□□□□□ -1.68
CSDE1-210ENST00000525878 PTGDR2Q9Y5Y4 395 aa4.58□□□□□ -1.68
CSDE1-210ENST00000525878 LMTK3Q96Q04 1460 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 POM121BA6NF01 834 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 NFATC1O95644 943 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 PPP1R3DO95685 299 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 S100BP04271 92 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-210ENST00000525878 HOXD3P31249 432 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-210ENST00000525878 NSUN2Q08J23 767 aaKnown RBP eCLIP4.57□□□□□ -1.68
CSDE1-210ENST00000525878 GPS2Q13227 327 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 MAPKAPK3Q16644 382 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 P3H1Q32P28 736 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 WDR93Q6P2C0 686 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 SLC16A12Q6ZSM3 486 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 Q6ZTK2 550 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 KRT27Q7Z3Y8 459 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 FAM177A1Q8N128 213 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-210ENST00000525878 TTC8Q8TAM2 541 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 TM6SF1Q9BZW5 370 aa4.57□□□□□ -1.68
CSDE1-210ENST00000525878 C6orf106Q9H6K1 298 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-210ENST00000525878 A0A1B0GVT2 93 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 TAF5LO75529 589 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 GAS8-AS1O95177 125 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 NDST3O95803 873 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 LCKP06239 509 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 ITGA5P08648 1049 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 KRT10P13645 584 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 PKMP14618 531 aaKnown RBP4.56□□□□□ -1.68
CSDE1-210ENST00000525878 IDEP14735 1019 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 PCYT1AP49585 367 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 ART1P52961 327 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 SHC2P98077 582 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 PRSS57Q6UWY2 283 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 ZNF329Q86UD4 541 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 GLIS1Q8NBF1 620 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 ADPRHL1Q8NDY3 354 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 ENGASEQ8NFI3 743 aa4.56□□□□□ -1.68
CSDE1-210ENST00000525878 GABPB2Q8TAK5 448 aaPredicted RBP4.56□□□□□ -1.68
CSDE1-210ENST00000525878 SLC22A17Q8WUG5 538 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms