RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 LGI4Q8N135 537 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 TMTC2Q8N394 836 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 TEX19Q8NA77 164 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 OR5AN1Q8NGI8 311 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 GLG1Q92896 1179 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 CCNL2Q96S94 520 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 SOX7Q9BT81 388 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 THUMPD2Q9BTF0 503 aaKnown RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 ADNPQ9H2P0 1102 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 USP36Q9P275 1121 aaKnown RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 POLKQ9UBT6 870 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 NOC2LQ9Y3T9 749 aaKnown RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 IPPQ9Y573 584 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 CTDP1Q9Y5B0 961 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 MORC2Q9Y6X9 1032 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-209ENST00000525132 PCDH15Q96QU1 1955 aa3.52□□□□□ -1.85
CSDE1-209ENST00000525132 LAMA4Q16363 1823 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 MYLKQ15746 1914 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 A0A0A6YYJ9 748 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 A0A0G2JNJ9 132 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 CCDC195A0A1B0GUA6 201 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 GPR42O15529 346 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 SLC26A4O43511 780 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 TNFSF14O43557 240 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 ZRANB2O95218 330 aaKnown RBP eCLIP3.51□□□□□ -1.85
CSDE1-209ENST00000525132 TYRP1P17643 537 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 RHCEP18577 417 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 LSP1P33241 339 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 ALDH5A1P51649 535 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-209ENST00000525132 CYP4F2P78329 520 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 ZNF267Q14586 743 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-209ENST00000525132 SMC1AQ14683 1233 aaKnown RBP3.51□□□□□ -1.85
CSDE1-209ENST00000525132 KRT72Q14CN4 511 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 DUOXA1Q1HG43 343 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 SHROOM1Q2M3G4 852 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-209ENST00000525132 HES3Q5TGS1 186 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 AGBL4Q5VU57 503 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 GRAMD4Q6IC98 578 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 ZNF804AQ7Z570 1209 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 SRGAP1Q7Z6B7 1085 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 ZZZ3Q8IYH5 903 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 HIPK4Q8NE63 616 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 LMBR1Q8WVP7 490 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 RTF1Q92541 710 aaKnown RBP3.51□□□□□ -1.85
CSDE1-209ENST00000525132 VCPIP1Q96JH7 1222 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 TEKT5Q96M29 485 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 WWC2-AS2Q96NR7 200 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 TAAR9Q96RI9 348 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 GAD1Q99259 594 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 FOXC2Q99958 501 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 SEC61A2Q9H9S3 476 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 MSL2Q9HCI7 577 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 CD248Q9HCU0 757 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 TOPORSQ9NS56 1045 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-209ENST00000525132 ZNF69Q9UC07 566 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 Q9UFV3 132 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 KCND3Q9UK17 655 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 PILRBQ9UKJ0 227 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 GTF2A1LQ9UNN4 478 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 SLC8A2Q9UPR5 921 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 RPS6KL1Q9Y6S9 549 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 COL7A1Q02388 2944 aa3.51□□□□□ -1.85
CSDE1-209ENST00000525132 HELZP42694 1942 aaKnown RBP3.5□□□□□ -1.85
CSDE1-209ENST00000525132 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 UBA6A0AVT1 1052 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-209ENST00000525132 A6NNZ2 444 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 TCP11X1B4DZS4 312 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 TPP1O14773 563 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 CRLF1O75462 422 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 SEC24DO94855 1032 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-209ENST00000525132 CXCL14O95715 111 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 ZBED1O96006 694 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 HSP90AA1P07900 732 aaKnown RBP3.5□□□□□ -1.85
CSDE1-209ENST00000525132 CELA3BP08861 270 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 SSTR2P30874 369 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 MANFP55145 182 aaKnown RBP3.5□□□□□ -1.85
CSDE1-209ENST00000525132 CTSWP56202 376 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 SLC6A3Q01959 620 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 ROM1Q03395 351 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 BIRC3Q13489 604 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 USP10Q14694 798 aaKnown RBP3.5□□□□□ -1.85
CSDE1-209ENST00000525132 PDCD1Q15116 288 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 LONRF1Q17RB8 773 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 RNF151Q2KHN1 245 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 SLC35G1Q2M3R5 365 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 HSP90AB3PQ58FF7 597 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 TTC38Q5R3I4 469 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 SLFN12LQ6IEE8 588 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 SLC30A10Q6XR72 485 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 GAREM2Q75VX8 874 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 CXorf67Q86X51 503 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-209ENST00000525132 PHYKPLQ8IUZ5 450 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 TTC9BQ8N6N2 239 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 Q8NA96 180 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 FAM156AQ8NDB6 213 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 CALML6Q8TD86 181 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 JADE3Q92613 823 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 HPS3Q969F9 1004 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 CCDC138Q96M89 665 aa3.5□□□□□ -1.85
CSDE1-209ENST00000525132 TBCBQ99426 244 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms