RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 HJURPQ8NCD3 748 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 MAIP1Q8WWC4 291 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 IGSF8Q969P0 613 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 PRICKLE1Q96MT3 831 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 HERPUD2Q9BSE4 406 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 PRDM16Q9HAZ2 1276 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 RRAGDQ9NQL2 400 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 SMARCAL1Q9NZC9 954 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 EPS15L1Q9UBC2 864 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 NEU3Q9UQ49 428 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 WNT6Q9Y6F9 365 aa16.33■□□□□ 0.2
TSPAN4-213ENST00000524895 IGLV3-10A0A075B6K4 115 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 ERCC2P18074 760 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 IFNAR2P48551 515 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 SLC9A4Q6AI14 798 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 CFAP52Q8N1V2 620 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 PQLC3Q8N755 202 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 ST13P5Q8NFI4 369 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 ELSPBP1Q96BH3 223 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 OTUB2Q96DC9 234 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 LRRC3BQ96PB8 259 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 KXD1Q9BQD3 176 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 DUS2Q9NX74 493 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 MPP6Q9NZW5 540 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 FAM50BQ9Y247 325 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 NR2E1Q9Y466 385 aa16.32■□□□□ 0.2
TSPAN4-213ENST00000524895 GOLGA6L10A0A0M3HER8 536 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 TCRBV7S2A1N4TA0A589 114 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 DRGXA6NNA5 263 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 DCLK1O15075 740 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 CYBBP04839 570 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 RHOQP17081 205 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 SERPINB6P35237 376 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 IRAK1P51617 712 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 RPS24P62847 133 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 ADCY2Q08462 1091 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 KLF1Q13351 362 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 PUS10Q3MIT2 529 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 C5orf22Q49AR2 442 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 MPPE1Q53F39 396 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 NCBP2-AS2Q69YL0 99 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 PTCRAQ6ISU1 281 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 PARM1Q6UWI2 310 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 VITQ6UXI7 678 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 TFAP2DQ7Z6R9 452 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 CIR1Q86X95 450 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 YAF2Q8IY57 180 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 RTL3Q8N8U3 475 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 OSCP1Q8WVF1 389 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 HAUS1Q96CS2 278 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 TMA16Q96EY4 203 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 MYEOVQ96EZ4 313 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 PHF7Q9BWX1 381 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 ETNK2Q9NVF9 386 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 DONSONQ9NYP3 566 aa16.31■□□□□ 0.2
TSPAN4-213ENST00000524895 APOC4-APOC2K7ER74 178 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 KRIT1O00522 736 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 TBL1XO60907 577 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 ECI2O75521 394 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 CNTN5O94779 1100 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 APOC2P02655 101 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 TGM2P21980 687 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 SGSHP51688 502 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 CDH4P55283 916 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 SMAD2Q15796 467 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 ALFQ53S48 1182 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 ARTNQ5T4W7 220 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 C1orf228Q6PIY5 440 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 TPGS1Q6ZTW0 290 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 CHST9Q7L1S5 443 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 MFSD6LQ8IWD5 586 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 PLD5Q8N7P1 536 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 DDI1Q8WTU0 396 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 DEPDC1BQ8WUY9 529 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 FGF14Q92915 247 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 BHMTQ93088 406 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 TMEM248Q9NWD8 314 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 MFHAS1Q9Y4C4 1052 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 HEY1Q9Y5J3 304 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 BRWD1Q9NSI6 2320 aa16.3■□□□□ 0.2
TSPAN4-213ENST00000524895 A0A1B0GVM2 712 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 TCAF2A6NFQ2 919 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 WASH4PA8MWX3 477 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 C2CD4DB7Z1M9 353 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 PDE2AO00408 941 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 GFRA2O00451 464 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 MFSD11O43934 449 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 CLDN11O75508 207 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 PSMC3P17980 439 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 MAPKAPK2P49137 400 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 FCHO2Q0JRZ9 810 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 HTR4Q13639 388 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 GRM2Q14416 872 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 PAFAH1B3Q15102 231 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 PDGFRLQ15198 375 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 NLRP14Q86W24 1093 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 CCDC117Q8IWD4 279 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 TTC13Q8NBP0 860 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms