RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 HVCN1Q96D96 273 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 TWNKQ96RR1 684 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 TRIM31Q9BZY9 425 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 CLPBQ9H078 707 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 WASH6PQ9NQA3 447 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 IFT80Q9P2H3 777 aaPredicted RBP4.34□□□□□ -1.71
SKP1-212ENST00000523966 ARPP21Q9UBL0 812 aaPredicted RBP4.34□□□□□ -1.71
SKP1-212ENST00000523966 SLC8A2Q9UPR5 921 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 ARID1BQ8NFD5 2236 aaPredicted RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 EMSYQ7Z589 1322 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 PRYO14603 147 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SYN3O14994 580 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 EPB41L2O43491 1005 aaKnown RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 GUCY1B2O75343 617 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 IGLV2-14P01704 120 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 CD63P08962 238 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 CNPP09543 421 aaKnown RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 AKR1A1P14550 325 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 ATF7P17544 494 aaPredicted RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 TGM2P21980 687 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SFPQP23246 707 aaKnown RBP eCLIP4.33□□□□□ -1.72
SKP1-212ENST00000523966 DDIT3P35638 169 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 PGM1P36871 562 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 TUBA4AP68366 448 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SHC2P98077 582 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 CHRNDQ07001 517 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.33□□□□□ -1.72
SKP1-212ENST00000523966 MTA1Q13330 715 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 THOC5Q13769 683 aaKnown RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 CBWD5Q5RIA9 395 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 MAP3K21Q5TCX8 1036 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 MIS18BP1Q6P0N0 1132 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 DENND1BQ6P3S1 775 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 LVRNQ6Q4G3 990 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 CHSY1Q86X52 802 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 HERVK_113Q902F9 699 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SH3KBP1Q96B97 665 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 KAZALD1Q96I82 304 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 REEP2Q9BRK0 252 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SCAND2PQ9GZW5 306 aaPredicted RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 OSBPL5Q9H0X9 879 aaPredicted RBP4.33□□□□□ -1.72
SKP1-212ENST00000523966 IKZF4Q9H2S9 585 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 ZHX3Q9H4I2 956 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SYNPO2LQ9H987 977 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 THAP1Q9NVV9 213 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SEMA5BQ9P283 1151 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 GJD2Q9UKL4 321 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 GDAQ9Y2T3 454 aa4.33□□□□□ -1.72
SKP1-212ENST00000523966 SPATA31A5Q5VU36 1347 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 SPATA31A6Q5VVP1 1343 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 SPATA31A7Q8IWB4 1347 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 VWA3AA6NCI4 1184 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 HMGB1P1B2RPK0 211 aaPredicted RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 PRRT4C9JH25 899 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 PEX12O00623 359 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 DSCR3O14972 297 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 HOXC11O43248 304 aaPredicted RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 CNTN5O94779 1100 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 KAT7O95251 611 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 HOXB9P17482 250 aaPredicted RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 IGFBP2P18065 325 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 BMP5P22003 454 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 PRKCHP24723 683 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 KRT9P35527 623 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 PTH2RP49190 550 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 ZNF84P51523 738 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 RPS6KA3P51812 740 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 TBL3Q12788 808 aaKnown RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 G3BP1Q13283 466 aaKnown RBP eCLIP4.32□□□□□ -1.72
SKP1-212ENST00000523966 ZNF268Q14587 947 aaPredicted RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 AWAT1Q58HT5 328 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 ZNF362Q5T0B9 420 aaPredicted RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 INTS11Q5TA45 600 aaKnown RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 LIPMQ5VYY2 423 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 NAA35Q5VZE5 725 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 ANO7Q6IWH7 933 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 FBXO42Q6P3S6 717 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 BBS12Q6ZW61 710 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 PTF1AQ7RTS3 328 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 TMEM200AQ86VY9 491 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 CPOQ8IVL8 374 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 FAM47BQ8NA70 645 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 OSR1Q8TAX0 266 aaPredicted RBP4.32□□□□□ -1.72
SKP1-212ENST00000523966 RITA1Q96K30 269 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 PPM1MQ96MI6 270 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 CD180Q99467 661 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 NPAS1Q99742 590 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 SLC26A6Q9BXS9 759 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 GPR63Q9BZJ6 419 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 UNC45AQ9H3U1 944 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 ERVK-5Q9HDB9 667 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 IRAK4Q9NWZ3 460 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 ALKBH4Q9NXW9 302 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 MTMR4Q9NYA4 1195 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 ZNF69Q9UC07 566 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 SERGEFQ9UGK8 458 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 TNFSF13BQ9Y275 285 aa4.32□□□□□ -1.72
SKP1-212ENST00000523966 LMTK3Q96Q04 1460 aa4.31□□□□□ -1.72
SKP1-212ENST00000523966 A0A1B0GVC2 190 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms