RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 AWAT1Q58HT5 328 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 CC2D1BQ5T0F9 858 aaKnown RBP4.28□□□□□ -1.72
PCM1-220ENST00000523896 RANBP10Q6VN20 620 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 PNLDC1Q8NA58 520 aaKnown RBP4.28□□□□□ -1.72
PCM1-220ENST00000523896 SEMA6DQ8NFY4 1073 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 CEP70Q8NHQ1 597 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 ZNF398Q8TD17 642 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 CLEC4CQ8WTT0 213 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 USP13Q92995 863 aaPredicted RBP4.28□□□□□ -1.72
PCM1-220ENST00000523896 NAF1Q96HR8 494 aaKnown RBP4.28□□□□□ -1.72
PCM1-220ENST00000523896 ASB2Q96Q27 587 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 HTATIP2Q9BUP3 242 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 GATA5Q9BWX5 397 aaPredicted RBP4.28□□□□□ -1.72
PCM1-220ENST00000523896 CHODLQ9H9P2 273 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 PRDM16Q9HAZ2 1276 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 RIC8AQ9NPQ8 531 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 ASNSD1Q9NWL6 643 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 PI4KBQ9UBF8 816 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 RCE1Q9Y256 329 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 B3GNT3Q9Y2A9 372 aa4.28□□□□□ -1.72
PCM1-220ENST00000523896 HEMK1Q9Y5R4 338 aaPredicted RBP4.28□□□□□ -1.72
PCM1-220ENST00000523896 SAC3D1A6NKF1 404 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 SGPL1O95470 568 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 CYP2A6P11509 494 aaPredicted RBP4.27□□□□□ -1.73
PCM1-220ENST00000523896 RXRAP19793 462 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 VPS41P49754 854 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 KPNB1Q14974 876 aaKnown RBP4.27□□□□□ -1.73
PCM1-220ENST00000523896 CTXN3Q4LDR2 81 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 TMEM119Q4V9L6 283 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 ALFQ53S48 1182 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 MAP3K21Q5TCX8 1036 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 RFX6Q8HWS3 928 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 CPOQ8IVL8 374 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 ADGRF3Q8IZF5 1079 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 FSIP1Q8NA03 581 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 USP38Q8NB14 1042 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 DDB2Q92466 427 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 CELF1Q92879 486 aaKnown RBP4.27□□□□□ -1.73
PCM1-220ENST00000523896 ARRDC3Q96B67 414 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 TBATAQ96M53 351 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 COG8Q96MW5 612 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 GPR78Q96P69 363 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 TWNKQ96RR1 684 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 TRIM2Q9C040 744 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 ARHGAP39Q9C0H5 1083 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 SFXN1Q9H9B4 322 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 PLEKHA2Q9HB19 425 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 NOD2Q9HC29 1040 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 PDE11AQ9HCR9 933 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 NRIP3Q9NQ35 241 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 ARL8BQ9NVJ2 186 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 PDP2Q9P2J9 529 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 DNAJC16Q9Y2G8 782 aa4.27□□□□□ -1.73
PCM1-220ENST00000523896 RRP7AQ9Y3A4 280 aaKnown RBP4.27□□□□□ -1.73
PCM1-220ENST00000523896 RRN3P2A6NIE6 340 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 PRRT4C9JH25 899 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 GRM8O00222 908 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 RRHO14718 337 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 RNF8O76064 485 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 CNTN5O94779 1100 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 ENO1P06733 434 aaKnown RBP4.26□□□□□ -1.73
PCM1-220ENST00000523896 RFPL3SP0C7P2 107 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 CHN1P15882 459 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 IDUAP35475 653 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 PNPLA4P41247 253 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 TLE2Q04725 743 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 POU5F1BQ06416 359 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 HNRNPA0Q13151 305 aaKnown RBP4.26□□□□□ -1.73
PCM1-220ENST00000523896 ANKRD1Q15327 319 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 SEC23BQ15437 767 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 ZNF484Q5JVG2 852 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 KIAA1324Q6UXG2 1013 aaKnown RBP4.26□□□□□ -1.73
PCM1-220ENST00000523896 ZNF813Q6ZN06 617 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 BBS12Q6ZW61 710 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 TFAP2DQ7Z6R9 452 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 ENDOVQ8N8Q3 282 aaKnown RBP4.26□□□□□ -1.73
PCM1-220ENST00000523896 EXD3Q8N9H8 876 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 C8orf58Q8NAV2 365 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 EVI5LQ96CN4 794 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 ERVK-5Q9HDB9 667 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 C9orf78Q9NZ63 289 aaPredicted RBP4.26□□□□□ -1.73
PCM1-220ENST00000523896 FLRT1Q9NZU1 646 aa4.26□□□□□ -1.73
PCM1-220ENST00000523896 STX16-NPEPL1H3BU86 382 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 STX16O14662 325 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 CSF1P09603 554 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 ALDOCP09972 364 aaKnown RBP4.25□□□□□ -1.73
PCM1-220ENST00000523896 ACP5P13686 325 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 TGM2P21980 687 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 PAX3P23760 479 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 CERS1P27544 350 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 TACR3P29371 465 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 SOX2P48431 317 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 SHC2P98077 582 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 B4GALNT1Q00973 533 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 UBE3AQ05086 875 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 SLC12A1Q13621 1099 aa4.25□□□□□ -1.73
PCM1-220ENST00000523896 THOC5Q13769 683 aaKnown RBP4.25□□□□□ -1.73
PCM1-220ENST00000523896 PAPD7Q5XG87 772 aaKnown RBP4.25□□□□□ -1.73
PCM1-220ENST00000523896 ZNF474Q6S9Z5 364 aaPredicted RBP4.25□□□□□ -1.73
PCM1-220ENST00000523896 SYNE3Q6ZMZ3 975 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms