RNA–Protein interactions for RNA: ENST00000523642.1

NDRG1-226, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-226ENST00000523642 FAM131BQ86XD5 332 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 PSTKQ8IV42 348 aaKnown RBP12.54□□□□□ -0.4
NDRG1-226ENST00000523642 RHOT2Q8IXI1 618 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 CHPFQ8IZ52 775 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 PHTF2Q8N3S3 785 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 CARNMT1Q8N4J0 409 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.54□□□□□ -0.4
NDRG1-226ENST00000523642 TC2NQ8N9U0 490 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 RPLP0P6Q8NHW5 317 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 ATRIPQ8WXE1 791 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 ANP32BQ92688 251 aaKnown RBP12.54□□□□□ -0.4
NDRG1-226ENST00000523642 CALR3Q96L12 384 aaKnown RBP12.54□□□□□ -0.4
NDRG1-226ENST00000523642 THAP2Q9H0W7 228 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 SEMA4AQ9H3S1 761 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 PPARGC1AQ9UBK2 798 aaKnown RBP12.54□□□□□ -0.4
NDRG1-226ENST00000523642 OR12D3Q9UGF7 316 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 GGA2Q9UJY4 613 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 VANGL2Q9ULK5 521 aa12.54□□□□□ -0.4
NDRG1-226ENST00000523642 DRGXA6NNA5 263 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 CCP110O43303 1012 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 NRDCO43847 1150 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 SRGAP2O75044 1071 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 TMEM253P0C7T8 217 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 PABPC1P11940 636 aaKnown RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 L1CAMP32004 1257 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 CNR2P34972 360 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 PCK1P35558 622 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 TIE1P35590 1138 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 ETFBP38117 255 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 KIR2DL1P43626 348 aaPredicted RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 SEC13P55735 322 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 HDAC4P56524 1084 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 RPS24P62847 133 aaKnown RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 SCAPQ12770 1279 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 BYSLQ13895 437 aaKnown RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 STARD3Q14849 445 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 HADHQ16836 314 aaKnown RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 BOLA3Q53S33 107 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 C6orf118Q5T5N4 469 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 RNF219Q5W0B1 726 aaPredicted RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 ZNF783Q6ZMS7 281 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 SETD3Q86TU7 594 aaPredicted RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 CCAR2Q8N163 923 aaKnown RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 CFAP52Q8N1V2 620 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 CHP1Q99653 195 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 EPAS1Q99814 870 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 CIPCQ9C0C6 399 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 ZYG11BQ9C0D3 744 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 PRMT8Q9NR22 394 aaPredicted RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 ABCB8Q9NUT2 735 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 CTTNBP2NLQ9P2B4 639 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 XPO7Q9UIA9 1087 aaKnown RBP12.53□□□□□ -0.4
NDRG1-226ENST00000523642 MMP17Q9ULZ9 603 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 COL4A2P08572 1712 aa12.53□□□□□ -0.4
NDRG1-226ENST00000523642 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 E9PAM4 449 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 SYNCRIPO60506 623 aaKnown RBP12.52□□□□□ -0.41
NDRG1-226ENST00000523642 KLF8O95600 359 aaPredicted RBP12.52□□□□□ -0.41
NDRG1-226ENST00000523642 APBB3O95704 486 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 DLDP09622 509 aaKnown RBP12.52□□□□□ -0.41
NDRG1-226ENST00000523642 HLA-FP30511 346 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 ARHGAP25P42331 645 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 PLK1P53350 603 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 KRT83P78385 493 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 CRY1Q16526 586 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 OTUD1Q5VV17 481 aaPredicted RBP12.52□□□□□ -0.41
NDRG1-226ENST00000523642 TRNP1Q6NT89 227 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 Q6ZS52 159 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 KIAA0907Q7Z7F0 614 aaPredicted RBP12.52□□□□□ -0.41
NDRG1-226ENST00000523642 IL17RCQ8NAC3 791 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 KDM1BQ8NB78 822 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 TSTD1Q8NFU3 115 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 ATOH1Q92858 354 aaPredicted RBP12.52□□□□□ -0.41
NDRG1-226ENST00000523642 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
NDRG1-226ENST00000523642 NUP85Q9BW27 656 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 CATSPERBQ9H7T0 1116 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 ZSCAN32Q9NX65 697 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 CALCOCO1Q9P1Z2 691 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 SUN2Q9UH99 717 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 ANAPC7Q9UJX3 599 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 PCDHGA2Q9Y5H1 932 aa12.52□□□□□ -0.41
NDRG1-226ENST00000523642 MIA3Q5JRA6 1907 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 IGLV3-10A0A075B6K4 115 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 PRRT4C9JH25 899 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
NDRG1-226ENST00000523642 GJB6O95452 261 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 SRPRAP08240 638 aaKnown RBP12.51□□□□□ -0.41
NDRG1-226ENST00000523642 SP9P0CG40 484 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 OR1E1P30953 314 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 MAGEA1P43355 309 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 SFSWAPQ12872 951 aaKnown RBP12.51□□□□□ -0.41
NDRG1-226ENST00000523642 GEN1Q17RS7 908 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 SH3PXD2AQ5TCZ1 1133 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 MBLAC2Q68D91 279 aa12.51□□□□□ -0.41
NDRG1-226ENST00000523642 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
NDRG1-226ENST00000523642 RWDD4Q6NW29 188 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms