RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	SLMAP	Q14BN4	828 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	TTC31	Q49AM3	519 aa	Predicted RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	HSP90B2P	Q58FF3	399 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	ARMC4	Q5T2S8	1044 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	UTP14C	Q5TAP6	766 aa	Known RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	RSPH3	Q86UC2	560 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	ECHDC2	Q86YB7	292 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	ITPRIP	Q8IWB1	547 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	NETO2	Q8NC67	525 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	HDAC7	Q8WUI4	952 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	SSH1	Q8WYL5	1049 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	PIGK	Q92643	395 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	TAF4B	Q92750	862 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	ELSPBP1	Q96BH3	223 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	RMDN3	Q96TC7	470 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	PAIP2	Q9BPZ3	127 aa	Known RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	ORAI3	Q9BRQ5	295 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	SLC26A6	Q9BXS9	759 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	API5	Q9BZZ5	524 aa	Known RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	EPB41L1	Q9H4G0	881 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	RXFP1	Q9HBX9	757 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	TNFRSF12A	Q9NP84	129 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	PXMP2	Q9NR77	195 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	TMEM51	Q9NW97	253 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	FBXL7	Q9UJT9	491 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	COA3	Q9Y2R0	106 aa	Predicted RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	CRYL1	Q9Y2S2	319 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	TNPO3	Q9Y5L0	923 aa	Known RBP	5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	FPGT-TNNI3K	V9GXZ4	949 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	RTTN	Q86VV8	2226 aa		5.52	□□□□□ -1.53
PABPC1-223	ENST00000523636	CCDC171	Q6TFL3	1326 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636		A0A1W2PQJ5	194 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	KIF5C	O60282	957 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	BRINP1	O60477	761 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	ATP9A	O75110	1047 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	TMEM127	O75204	238 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	COQ9	O75208	318 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	PRDM1	O75626	825 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	TPPP	O94811	219 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	IL33	O95760	270 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	FUCA1	P04066	466 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	CKM	P06732	381 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	CCDC159	P0C7I6	412 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	ATXN1L	P0C7T5	689 aa	Known RBP	5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	RNF224	P0DH78	156 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	GLI4	P10075	376 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	ITGB6	P18564	788 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	FPR2	P25090	351 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MARK3	P27448	753 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	TRHR	P34981	398 aa	Predicted RBP	5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	SLC6A11	P48066	632 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	TRPC1	P48995	793 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	CLDN6	P56747	220 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	LRRC32	Q14392	662 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	DHCR24	Q15392	516 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	SMAD1	Q15797	465 aa	Known RBP	5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	SLC45A4	Q5BKX6	768 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MFSD4B	Q5TF39	518 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	ARHGAP40	Q5TG30	622 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	NUGGC	Q68CJ6	796 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	ITPRIPL1	Q6GPH6	555 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	TMCO3	Q6UWJ1	677 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	VIT	Q6UXI7	678 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	C4orf50	Q6ZRC1	276 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	UBE2R2	Q712K3	238 aa	Predicted RBP	5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	PALB2	Q86YC2	1186 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	NAXD	Q8IW45	347 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MMP21	Q8N119	569 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MINDY1	Q8N5J2	469 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MYCT1	Q8N699	235 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	TRAPPC12	Q8WVT3	735 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	HDAC2	Q92769	488 aa	Known RBP	5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	FBXW5	Q969U6	566 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	CHFR	Q96EP1	664 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MCRS1	Q96EZ8	462 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MBOAT7	Q96N66	472 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	RNF32	Q9H0A6	362 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	SLC6A17	Q9H1V8	727 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	UNC45A	Q9H3U1	944 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	PLEKHA4	Q9H4M7	779 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	BRD9	Q9H8M2	597 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	IPPK	Q9H8X2	491 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	MARCH5	Q9NX47	278 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	DNMT3B	Q9UBC3	853 aa	Known RBP	5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	ANKRD6	Q9Y2G4	727 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	PCSK5	Q92824	1860 aa		5.51	□□□□□ -1.53
PABPC1-223	ENST00000523636	ATXN2	Q99700	1313 aa	Known RBP	5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	RRN3P2	A6NIE6	340 aa		5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636		F8W810	466 aa		5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	RTCA	O00442	366 aa	Known RBP	5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	AREL1	O15033	823 aa		5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	RPS6KA5	O75582	802 aa		5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	SNUPN	O95149	360 aa	Known RBP	5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	BAG2	O95816	211 aa		5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	CYBB	P04839	570 aa		5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	CCDC175	P0C221	793 aa		5.5	□□□□□ -1.53
PABPC1-223	ENST00000523636	JUNB	P17275	347 aa	Predicted RBP	5.5	□□□□□ -1.53

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