RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 FAM71DQ8N9W8 422 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 HAPLN3Q96S86 360 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 WNT6Q9Y6F9 365 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 ZFP37Q9Y6Q3 630 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 NUP205Q92621 2012 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 TYW5A2RUC4 315 aaKnown RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 EFCAB8A8MWE9 144 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 KCNK1O00180 336 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 CES2O00748 559 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 PHF2O75151 1096 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 HEXIM1O94992 359 aaKnown RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 MTM1Q13496 603 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 NADSYN1Q6IA69 706 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 ANKRD54Q6NXT1 300 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 BNIPLQ7Z465 357 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 CCDC26Q8TAB7 109 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 USP13Q92995 863 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 CATSPERBQ9H7T0 1116 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 DZANK1Q9NVP4 752 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 F5P12259 2224 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 CCDC188H7C350 402 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 APOC4-APOC2K7ER74 178 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 KCNN4O15554 427 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 MOSPD3O75425 235 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ECEL1O95672 775 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 APOC2P02655 101 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ZSCAN5DPP0CG00 497 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ETS1P14921 441 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 AIF1P55008 147 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 KLF1Q13351 362 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 PRPF38BQ5VTL8 546 aaKnown RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 SNX30Q5VWJ9 437 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 NCBP2-AS2Q69YL0 99 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 NPWQ8N729 165 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 USP33Q8TEY7 942 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 PLD4Q96BZ4 506 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 GDAP1L1Q96MZ0 367 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ZYG11BQ9C0D3 744 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 DMGDHQ9UI17 866 aaKnown RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 H0Y626 953 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 TBL1XO60907 577 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 COILP38432 576 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 SGSHP51688 502 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 RING1Q06587 406 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 SCAPQ12770 1279 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ADGRF1Q5T601 910 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 TRIM68Q6AZZ1 485 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 KLHDC10Q6PID8 442 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 DDX42Q86XP3 938 aaKnown RBP eCLIP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 NPAS3Q8IXF0 933 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 GSPT2Q8IYD1 628 aaKnown RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 NAT16Q8N8M0 369 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 TDRD5Q8NAT2 981 aaKnown RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 MYRIPQ8NFW9 859 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 TMA16Q96EY4 203 aaKnown RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 RPGRIP1Q96KN7 1286 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 LINC00597Q9H2U6 94 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 DTLQ9NZJ0 730 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 FOSL2P15408 326 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 CHRNA3P32297 505 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ACTN2P35609 894 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ARSEP51690 589 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 SLC10A2Q12908 348 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 CDH18Q13634 790 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 MAATS1Q7Z4T9 603 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 DEFB123Q8N688 67 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 TTC13Q8NBP0 860 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 LEMD2Q8NC56 503 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 PABPC5Q96DU9 382 aaKnown RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 ZFRQ96KR1 1074 aaKnown RBP9.62□□□□□ -0.87
SDCBP-212ENST00000523483 EPB41L5Q9HCM4 733 aa9.62□□□□□ -0.87
SDCBP-212ENST00000523483 GREB1Q4ZG55 1949 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 FGF19O95750 216 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 GAS8O95995 478 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 RBL1P28749 1068 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 SERPINB6P35237 376 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 SIX1Q15475 284 aaPredicted RBP9.61□□□□□ -0.87
SDCBP-212ENST00000523483 TRADDQ15628 312 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 FAM133BQ5BKY9 247 aaKnown RBP9.61□□□□□ -0.87
SDCBP-212ENST00000523483 FAXCQ5TGI0 409 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 IL31Q6EBC2 164 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 GPR149Q86SP6 731 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 PSTKQ8IV42 348 aaKnown RBP9.61□□□□□ -0.87
SDCBP-212ENST00000523483 CCDC117Q8IWD4 279 aaPredicted RBP9.61□□□□□ -0.87
SDCBP-212ENST00000523483 MUC3BQ9H195 1237 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 CLEC1BQ9P126 229 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 SNX24Q9Y343 169 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 NEDD8-MDP1E9PL57 170 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 LIASO43766 372 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 ZFXP17010 805 aaPredicted RBP9.61□□□□□ -0.87
SDCBP-212ENST00000523483 ADCY8P40145 1251 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 GDF10P55107 478 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 NNTQ13423 1086 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 ADAM15Q13444 863 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 GRM2Q14416 872 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 RABGAP1LQ5R372 815 aa9.61□□□□□ -0.87
SDCBP-212ENST00000523483 HEATR6Q6AI08 1181 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms