RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 APOBEC3GQ9HC16 384 aaKnown RBP12.1□□□□□ -0.47
SDCBP-211ENST00000523441 PNPLA8Q9NP80 782 aa12.1□□□□□ -0.47
SDCBP-211ENST00000523441 USP3Q9Y6I4 520 aa12.1□□□□□ -0.47
SDCBP-211ENST00000523441 UBE4BO95155 1302 aa12.1□□□□□ -0.47
SDCBP-211ENST00000523441 TULP2O00295 520 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 YKT6O15498 198 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 CSO75390 466 aaKnown RBP12.09□□□□□ -0.47
SDCBP-211ENST00000523441 IL1BP01584 269 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
SDCBP-211ENST00000523441 TRIM49P0CI25 452 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 TRIM49CP0CI26 452 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 CSKP41240 450 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 GCLMP48507 274 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 VAC14Q08AM6 782 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 TRIP4Q15650 581 aaPredicted RBP12.09□□□□□ -0.47
SDCBP-211ENST00000523441 ZACNQ401N2 412 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 HS1BP3Q53T59 392 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 C3orf38Q5JPI3 329 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.475e-10■■■■□ 20.2
SDCBP-211ENST00000523441 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 STK40Q8N2I9 435 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 AADATQ8N5Z0 425 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 KLK6Q92876 244 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 VCPIP1Q96JH7 1222 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 ZNF578Q96N58 590 aaPredicted RBP12.09□□□□□ -0.47
SDCBP-211ENST00000523441 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 KBTBD4Q9NVX7 518 aa12.09□□□□□ -0.47
SDCBP-211ENST00000523441 HEMK1Q9Y5R4 338 aaPredicted RBP12.09□□□□□ -0.47
SDCBP-211ENST00000523441 ZBED1O96006 694 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 LCP1P13796 627 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 ACP1P24666 158 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 SLC6A4P31645 630 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 METAP1P53582 386 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 ADPRHP54922 357 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 UCNP55089 124 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 E2F1Q01094 437 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 ADIGQ0VDE8 80 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 ILKQ13418 452 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 CUL4BQ13620 913 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 STAT4Q14765 748 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 SLC39A14Q15043 492 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 E2F4Q16254 413 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 GOLGA7BQ2TAP0 167 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 HNRNPA1L2Q32P51 320 aaKnown RBP12.08□□□□□ -0.48
SDCBP-211ENST00000523441 PROX2Q3B8N5 592 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 ZSCAN23Q3MJ62 389 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 ADGRF1Q5T601 910 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 PRPF39Q86UA1 669 aaKnown RBP12.08□□□□□ -0.48
SDCBP-211ENST00000523441 FAM217AQ8IXS0 508 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 CFAP52Q8N1V2 620 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 TAF4BQ92750 862 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 TATDN2Q93075 761 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 MED8Q96G25 268 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 MYO19Q96H55 970 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 RPL10LQ96L21 214 aaKnown RBP12.08□□□□□ -0.48
SDCBP-211ENST00000523441 IPO9Q96P70 1041 aaKnown RBP12.08□□□□□ -0.48
SDCBP-211ENST00000523441 ABCG4Q9H172 646 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 LRRC4Q9HBW1 653 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 UCKL1Q9NWZ5 548 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 SCML1Q9UN30 329 aa12.08□□□□□ -0.48
SDCBP-211ENST00000523441 POLR2DO15514 142 aaKnown RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 OPA1O60313 960 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 RTN2O75298 545 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 VAV1P15498 845 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 STK19P49842 368 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 CCR5P51681 352 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 SLC8A3P57103 927 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 SNRPFP62306 86 aaKnown RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 FOXD4L6Q3SYB3 417 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 C9orf64Q5T6V5 341 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 RNF219Q5W0B1 726 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 CRTC1Q6UUV9 634 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 FOXD4L3Q6VB84 417 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 KANSL1Q7Z3B3 1105 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 SLC25A45Q8N413 288 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 ZNF276Q8N554 614 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 OXR1Q8N573 874 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 CCDC150Q8NCX0 1101 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 UBA3Q8TBC4 463 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 TTC9Q92623 222 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 HIC2Q96JB3 615 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 DEPDC7Q96QD5 511 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 DNAI2Q9GZS0 605 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 NIF3L1Q9GZT8 377 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 CGNQ9P2M7 1197 aaKnown RBP12.07□□□□□ -0.48
SDCBP-211ENST00000523441 SLCO3A1Q9UIG8 710 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 SATB2Q9UPW6 733 aa12.07□□□□□ -0.48
SDCBP-211ENST00000523441 ERVW-1Q9UQF0 538 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms