RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MYBPC2Q14324 1141 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ZNF268Q14587 947 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SF3A1Q15459 793 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SLC10A6Q3KNW5 377 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 NEK8Q86SG6 692 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ITIH5Q86UX2 942 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 LRRTM3Q86VH5 581 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 MON1AQ86VX9 555 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CPA6Q8N4T0 437 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 TXNDC5Q8NBS9 432 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 HMGB4Q8WW32 186 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CYP2S1Q96SQ9 504 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SEPT5Q99719 369 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ACO2Q99798 780 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CCDC94Q9BW85 323 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 SEMA4CQ9C0C4 833 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 MKRN2Q9H000 416 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CLMPQ9H6B4 373 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 KIF9Q9HAQ2 790 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 IL21RQ9HBE5 538 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 TNFRSF12AQ9NP84 129 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CD93Q9NPY3 652 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 METTL5Q9NRN9 209 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 GJB4Q9NTQ9 266 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 DUS2Q9NX74 493 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 ACSL6Q9UKU0 697 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 BSNQ9UPA5 3926 aa7.14□□□□□ -1.27
SDCBP-210ENST00000522843 APOBEC2Q9Y235 224 aaKnown RBP7.14□□□□□ -1.27
SDCBP-210ENST00000522843 CABIN1Q9Y6J0 2220 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 IGHV1OR15-9A0A0B4J2B8 117 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 TCRBV21S2A2A0A5A6 115 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 DTNBO60941 627 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 MED24O75448 989 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 HAPLN1P10915 354 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 XRCC6P12956 609 aaKnown RBP eCLIP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 GCFC2P16383 781 aaKnown RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 PFKLP17858 780 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 CYP11B2P19099 503 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 ENDOUP21128 410 aaKnown RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 MARCKSP29966 332 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 PDIA3P30101 505 aaKnown RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 LRPAP1P30533 357 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 HSPA4P34932 840 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 DPP6P42658 865 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 BNC1Q01954 994 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 SCRN1Q12765 414 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 BFSP1Q12934 665 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 GRIK2Q13002 908 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 ZBTB6Q15916 424 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 ZC2HC1CQ53FD0 456 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 CC2D1AQ6P1N0 951 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 RPTNQ6XPR3 784 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 EFCAB13Q8IY85 973 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 MCPH1Q8NEM0 835 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 DEPTORQ8TB45 409 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 LRRC15Q8TF66 581 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 RNF34Q969K3 372 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 SNX21Q969T3 373 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 ZBTB45Q96K62 511 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 FCRL3Q96P31 734 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 ACAP3Q96P50 834 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 IPO9Q96P70 1041 aaKnown RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 AGXT2Q9BYV1 514 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 ZCWPW1Q9H0M4 648 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 CD248Q9HCU0 757 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 TOPORSQ9NS56 1045 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 GFOD1Q9NXC2 390 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 HSFX1Q9UBD0 423 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 BTBD3Q9Y2F9 522 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 MYOFQ9NZM1 2061 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 ANAPC1Q9H1A4 1944 aa7.13□□□□□ -1.27
SDCBP-210ENST00000522843 TEP1Q99973 2627 aaKnown RBP7.13□□□□□ -1.27
SDCBP-210ENST00000522843 A0A1W2PQD8 194 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 K7ESM1 405 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 AP5Z1O43299 807 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 ALDH1A2O94788 518 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 RECKO95980 971 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 MCF2P10911 925 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 GABRG2P18507 467 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 TYMPP19971 482 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 ANP32AP39687 249 aaKnown RBP7.12□□□□□ -1.27
SDCBP-210ENST00000522843 IFNAR2P48551 515 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 CLDN6P56747 220 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 EVCP57679 992 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 MRPS21P82921 87 aaKnown RBP7.12□□□□□ -1.27
SDCBP-210ENST00000522843 MYO1EQ12965 1108 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 DMP1Q13316 513 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-210ENST00000522843 AUHQ13825 339 aaKnown RBP7.12□□□□□ -1.27
SDCBP-210ENST00000522843 SMAD1Q15797 465 aaKnown RBP7.12□□□□□ -1.27
SDCBP-210ENST00000522843 PLEKHG6Q3KR16 790 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 MGAT5BQ3V5L5 792 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 ZNF568Q3ZCX4 644 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 SLC39A12Q504Y0 691 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 SDHAF4Q5VUM1 108 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 PIK3AP1Q6ZUJ8 805 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 CATSPER3Q86XQ3 398 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 FBXL16Q8N461 479 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 TRIML1Q8N9V2 468 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 NUP43Q8NFH3 380 aa7.12□□□□□ -1.27
SDCBP-210ENST00000522843 ATP2A3Q93084 1043 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms