RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SYNCRIPO60506 623 aaKnown RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 DLATP10515 647 aaKnown RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 BMP6P22004 513 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 GJB2P29033 226 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 GNL1P36915 607 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 STAT6P42226 847 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 WASP42768 502 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 NOP14P78316 857 aaKnown RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 TAF10Q12962 218 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 SEMA3BQ13214 749 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 LY6G5CQ5SRR4 150 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 IL27RAQ6UWB1 636 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF720Q7Z2F6 126 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 PIP4P1Q86T03 277 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 OSTM1Q86WC4 334 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 CCDC65Q8IXS2 484 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 NUP93Q8N1F7 819 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 TRIML1Q8N9V2 468 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 OLIG1Q8TAK6 271 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 UCMAQ8WVF2 138 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 PCED1BQ96HM7 432 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 TNIP3Q96KP6 325 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 C8orf48Q96LL4 319 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 TTLL2Q9BWV7 592 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 BBS2Q9BXC9 721 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 PCIF1Q9H4Z3 704 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 KIAA1586Q9HCI6 787 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 PDE11AQ9HCR9 933 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 ZDHHC4Q9NPG8 344 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 SPHK2Q9NRA0 654 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 MBD1Q9UIS9 605 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 STYXL1Q9Y6J8 313 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 KIAA1549LQ6ZVL6 1849 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 ATG2BQ96BY7 2078 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 ANK1P16157 1881 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 PTPRJQ12913 1337 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 A0A1B0GTW7 788 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 ZNF840PA6NDX5 716 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 TAF4O00268 1085 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 GABRDO14764 452 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 HOXC11O43248 304 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 SH3BP5O60239 455 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 OAS1P00973 400 aaKnown RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 P4HA1P13674 534 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 GABRG2P18507 467 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 WARSP23381 471 aaKnown RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 MATKP42679 507 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 SLC6A11P48066 632 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 GRIK2Q13002 908 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 BIRC3Q13489 604 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 RABEP1Q15276 862 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 CCDC142Q17RM4 750 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 SOWAHAQ2M3V2 549 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 COL28A1Q2UY09 1125 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 CCDC157Q569K6 752 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 CRELD2Q6UXH1 353 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 CCDC73Q6ZRK6 1079 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 ADAT2Q7Z6V5 191 aaKnown RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 TADA2BQ86TJ2 420 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 C12orf40Q86WS4 652 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 ZSWIM9Q86XI8 627 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 WDR49Q8IV35 697 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 GALNT15Q8N3T1 639 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 B3GALNT2Q8NCR0 500 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 BHLHE22Q8NFJ8 381 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 MYCBPAPQ8TBZ2 947 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 GRIN3AQ8TCU5 1115 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 IPO4Q8TEX9 1081 aaKnown RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 SYAP1Q96A49 352 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 ERLEC1Q96DZ1 483 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 SMARCD1Q96GM5 515 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 LRIG1Q96JA1 1093 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 CDC6Q99741 560 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 CBWD1Q9BRT8 395 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 LRRC27Q9C0I9 530 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 DMAP1Q9NPF5 467 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 TLR8Q9NR97 1041 aaKnown RBP6.58□□□□□ -1.36
PABPC1-220ENST00000522658 BLOC1S4Q9NUP1 217 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 TMEM74BQ9NUR3 256 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 PANK4Q9NVE7 773 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 INTS13Q9NVM9 706 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 WDR35Q9P2L0 1181 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 WASF3Q9UPY6 502 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 SCN1AP35498 2009 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 DENND4CQ5VZ89 1909 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 MYO16Q9Y6X6 1858 aa6.58□□□□□ -1.36
PABPC1-220ENST00000522658 IGHV1OR15-9A0A0B4J2B8 117 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 SOWAHDA6NJG2 315 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.57□□□□□ -1.36
PABPC1-220ENST00000522658 ENC1O14682 589 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 FLRT2O43155 660 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 COCHO43405 550 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 HCRTO43612 131 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 ATP2C2O75185 946 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 TULP3O75386 442 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 CYBBP04839 570 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 NCAM1P13591 858 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 TYRP14679 529 aa6.57□□□□□ -1.36
PABPC1-220ENST00000522658 PTPN1P18031 435 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms