RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ACAD10Q6JQN1 1059 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 NUDT18Q6ZVK8 323 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 ZNF683Q8IZ20 524 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 MCOLN2Q8IZK6 566 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 KCNV2Q8TDN2 545 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 DDX50Q9BQ39 737 aaKnown RBP18.46■□□□□ 0.55
CLK4-211ENST00000522556 SEMA4AQ9H3S1 761 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 MTG2Q9H4K7 406 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 SDK1Q7Z5N4 2213 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 ABCA7Q8IZY2 2146 aa18.46■□□□□ 0.55
CLK4-211ENST00000522556 FAM186AA6NE01 2351 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 DOCK4Q8N1I0 1966 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 CCDC163A0A0D9SF12 145 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 AP5Z1O43299 807 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 SLC2A3P11169 496 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 NDUFV2P19404 249 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 CTSOP43234 321 aaPredicted RBP18.45■□□□□ 0.54
CLK4-211ENST00000522556 RPL7AP62424 266 aaKnown RBP18.45■□□□□ 0.54
CLK4-211ENST00000522556 OGDHQ02218 1023 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 KLHL30Q0D2K2 578 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 CDH18Q13634 790 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 ENPP2Q13822 863 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 CEP68Q76N32 757 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 TRMT11Q7Z4G4 463 aaKnown RBP18.45■□□□□ 0.54
CLK4-211ENST00000522556 CACUL1Q86Y37 369 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 APCDD1Q8J025 514 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 CCAR2Q8N163 923 aaKnown RBP18.45■□□□□ 0.54
CLK4-211ENST00000522556 C3orf20Q8ND61 904 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 FIBINQ8TAL6 211 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 WDCPQ9H6R7 721 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 RRN3Q9NYV6 651 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 FRYLO94915 3013 aa18.45■□□□□ 0.54
CLK4-211ENST00000522556 A0A1W2PQJ5 194 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 CNTN5O94779 1100 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 CALB1P05937 261 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 KRT3P12035 628 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 PDGFRAP16234 1089 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 MZF1P28698 734 aaPredicted RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 RDXP35241 583 aaKnown RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 CSKP41240 450 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 EIF4HQ15056 248 aaKnown RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 ALFQ53S48 1182 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 PPP1R15BQ5SWA1 713 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 CXorf57Q6NSI4 855 aaKnown RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 WDR59Q6PJI9 974 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 ARCQ7LC44 396 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 AHI1Q8N157 1196 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 WFIKKN2Q8TEU8 576 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 MYO19Q96H55 970 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 RPRD1AQ96P16 312 aaPredicted RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 MCEEQ96PE7 176 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 SELENOOQ9BVL4 669 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 POLMQ9NP87 494 aaPredicted RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 BCCIPQ9P287 314 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLK4-211ENST00000522556 THADAQ6YHU6 1953 aa18.44■□□□□ 0.54
CLK4-211ENST00000522556 RIF1Q5UIP0 2472 aaKnown RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 TNRC6BQ9UPQ9 1833 aaKnown RBP18.44■□□□□ 0.54
CLK4-211ENST00000522556 TYW5A2RUC4 315 aaKnown RBP18.43■□□□□ 0.54
CLK4-211ENST00000522556 H0Y626 953 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 CCP110O43303 1012 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 ENDOD1O94919 500 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 CCDC172P0C7W6 258 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 SDC4P31431 198 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 HDAC4P56524 1084 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 CCDC6Q16204 474 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 PITRM1Q5JRX3 1037 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 BRMS1LQ5PSV4 323 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 DNAJC24Q6P3W2 148 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 PGBD3Q8N328 593 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 CCDC185Q8N715 623 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 HINFPQ9BQA5 517 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 IRX2Q9BZI1 471 aaPredicted RBP18.43■□□□□ 0.54
CLK4-211ENST00000522556 EDEM3Q9BZQ6 932 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 TRIM7Q9C029 511 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 MKRN2Q9H000 416 aaKnown RBP18.43■□□□□ 0.54
CLK4-211ENST00000522556 TMEM245Q9H330 911 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 PARD6AQ9NPB6 346 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 MPP6Q9NZW5 540 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 SLC12A6Q9UHW9 1150 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 MBD1Q9UIS9 605 aaPredicted RBP18.43■□□□□ 0.54
CLK4-211ENST00000522556 CAPN11Q9UMQ6 739 aa18.43■□□□□ 0.54
CLK4-211ENST00000522556 EP300Q09472 2414 aaPredicted RBP18.43■□□□□ 0.54
CLK4-211ENST00000522556 SIGLEC16A6NMB1 481 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 GPD1P21695 349 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 CASP14P31944 242 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 CNR2P34972 360 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 PTPN9P43378 593 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 MAP7D1Q3KQU3 841 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 PLK5Q496M5 336 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 FNDC3BQ53EP0 1204 aaKnown RBP18.42■□□□□ 0.54
CLK4-211ENST00000522556 TDRD12Q587J7 1177 aaKnown RBP18.42■□□□□ 0.54
CLK4-211ENST00000522556 SERPINA13PQ6UXR4 307 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.42■□□□□ 0.54
CLK4-211ENST00000522556 FAM172AQ8WUF8 416 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 UCMAQ8WVF2 138 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 RUBCNQ92622 972 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 MRGPRX3Q96LB0 322 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 MRGPRX1Q96LB2 322 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 NUP58Q9BVL2 599 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms