RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.43■■□□□ 1.02
SDCBP-209ENST00000522243 DDIT4Q9NX09 232 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 SUSD2Q9UGT4 822 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 SUN2Q9UH99 717 aa21.43■■□□□ 1.02
SDCBP-209ENST00000522243 CNOT1A5YKK6 2376 aaKnown RBP21.42■■□□□ 1.02
SDCBP-209ENST00000522243 METTL12A8MUP2 240 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 OPHN1O60890 802 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 SYPP08247 313 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 ACSL1P33121 698 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 ANP32AP39687 249 aaKnown RBP21.42■■□□□ 1.02
SDCBP-209ENST00000522243 EIF4EBP2Q13542 120 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-209ENST00000522243 RAPGEF1Q13905 1077 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 KCNJ12Q14500 433 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 DRAP1Q14919 205 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-209ENST00000522243 PTPN20Q4JDL3 420 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 PITRM1Q5JRX3 1037 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 EFHC1Q5JVL4 640 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 C11orf57Q6ZUT1 292 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-209ENST00000522243 CIR1Q86X95 450 aaPredicted RBP21.42■■□□□ 1.02
SDCBP-209ENST00000522243 DNASE2BQ8WZ79 361 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 RNF34Q969K3 372 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 TTC17Q96AE7 1141 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 NOX5Q96PH1 765 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 SLC2A13Q96QE2 648 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 LMBRD1Q9NUN5 540 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 FHOD1Q9Y613 1164 aa21.42■■□□□ 1.02
SDCBP-209ENST00000522243 KCNU1A8MYU2 1149 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 F5H5T6 163 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 HSF2BPO75031 334 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 GLI1P08151 1106 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 CTSOP43234 321 aaPredicted RBP21.41■■□□□ 1.02
SDCBP-209ENST00000522243 ST8SIA6P61647 398 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 FOXC1Q12948 553 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 SEMA3BQ13214 749 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 OLFML1Q6UWY5 402 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 DHX40Q8IX18 779 aaKnown RBP21.41■■□□□ 1.02
SDCBP-209ENST00000522243 FAM71AQ8IYT1 594 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 APCDD1Q8J025 514 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 SNX19Q92543 992 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 MRGPRX3Q96LB0 322 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 SLC32A1Q9H598 525 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 C6orf106Q9H6K1 298 aaPredicted RBP21.41■■□□□ 1.02
SDCBP-209ENST00000522243 SYNCQ9H7C4 482 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 ASNSD1Q9NWL6 643 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 KIAA1522Q9P206 1035 aaPredicted RBP21.41■■□□□ 1.02
SDCBP-209ENST00000522243 SLC12A6Q9UHW9 1150 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 EIF2B4Q9UI10 523 aaKnown RBP21.41■■□□□ 1.02
SDCBP-209ENST00000522243 ERVW-1Q9UQF0 538 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 NUMA1Q14980 2115 aa21.41■■□□□ 1.02
SDCBP-209ENST00000522243 A0A1B0GTW7 788 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 SIN3BO75182 1162 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 DNTTP04053 509 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 ASLP04424 464 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 NME3Q13232 169 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 PRMT1Q99873 361 aaKnown RBP21.4■■□□□ 1.02
SDCBP-209ENST00000522243 PDCL3Q9H2J4 239 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 TAB2Q9NYJ8 693 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 CEP83Q9Y592 693 aa21.4■■□□□ 1.02
SDCBP-209ENST00000522243 MOCS3O95396 460 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 TOP3BO95985 862 aaKnown RBP21.39■■□□□ 1.01
SDCBP-209ENST00000522243 ABCB4P21439 1286 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 CCR1P32246 355 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 SLC6A3Q01959 620 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 GRIK2Q13002 908 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 KLHDC7AQ5VTJ3 777 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 TAF3Q5VWG9 929 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 ZNF776Q68DI1 518 aaPredicted RBP21.39■■□□□ 1.01
SDCBP-209ENST00000522243 RPL10LQ96L21 214 aaKnown RBP21.39■■□□□ 1.01
SDCBP-209ENST00000522243 FBRSQ9HAH7 460 aa21.39■■□□□ 1.01
SDCBP-209ENST00000522243 SPAARA0A1B0GVQ0 90 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 TTC34A8MYJ7 566 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 BCAT2O15382 392 aaPredicted RBP21.38■■□□□ 1.01
SDCBP-209ENST00000522243 DAB1O75553 588 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 SLC2A3P11169 496 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 CYP11B1P15538 503 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 PDGFRAP16234 1089 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 SPINK2P20155 84 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 GGCXP38435 758 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 BPIFB4P59827 614 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 RNASE9P60153 205 aaKnown RBP21.38■■□□□ 1.01
SDCBP-209ENST00000522243 SHC2P98077 582 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 HNRNPA1L2Q32P51 320 aaKnown RBP21.38■■□□□ 1.01
SDCBP-209ENST00000522243 TCP11X2Q5H9J9 407 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 PIP4P1Q86T03 277 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 CCAR2Q8N163 923 aaKnown RBP21.38■■□□□ 1.01
SDCBP-209ENST00000522243 GANCQ8TET4 914 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 BTBD1Q9H0C5 482 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 RSPH9Q9H1X1 276 aaPredicted RBP21.38■■□□□ 1.01
SDCBP-209ENST00000522243 SLCO3A1Q9UIG8 710 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 NFE2L3Q9Y4A8 694 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 SLCO1B1Q9Y6L6 691 aa21.38■■□□□ 1.01
SDCBP-209ENST00000522243 NYNRINQ9P2P1 1898 aaKnown RBP21.37■■□□□ 1.01
SDCBP-209ENST00000522243 LAMA1P25391 3075 aa21.37■■□□□ 1.01
SDCBP-209ENST00000522243 M0QYT0 321 aa21.37■■□□□ 1.01
SDCBP-209ENST00000522243 SEMA4FO95754 770 aa21.37■■□□□ 1.01
SDCBP-209ENST00000522243 SRPRAP08240 638 aaKnown RBP21.37■■□□□ 1.01
SDCBP-209ENST00000522243 CD59P13987 128 aa21.37■■□□□ 1.01
SDCBP-209ENST00000522243 MZF1P28698 734 aaPredicted RBP21.37■■□□□ 1.01
SDCBP-209ENST00000522243 NOS2P35228 1153 aa21.37■■□□□ 1.01
SDCBP-209ENST00000522243 STK19P49842 368 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms