RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 GET4Q7L5D6 327 aaPredicted RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 ARID3BQ8IVW6 561 aaPredicted RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 CCDC105Q8IYK2 499 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 ZSCAN18Q8TBC5 510 aaPredicted RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 FRMD8P1Q9BZ68 369 aaPredicted RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 S1PR5Q9H228 398 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 PPARGC1AQ9UBK2 798 aaKnown RBP22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 AMACRQ9UHK6 382 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 DNPEPQ9ULA0 475 aa22.02■■□□□ 1.12
R3HCC1-208ENST00000522012 DRGXA6NNA5 263 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 TSPAN3O60637 253 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 PRAMEF12O95522 483 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 NR2C2P49116 596 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 FNTAP49354 379 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 BYSLQ13895 437 aaKnown RBP22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 PAFAH1B3Q15102 231 aaKnown RBP22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 NOMO1Q15155 1222 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 CCDC70Q6NSX1 233 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 C8orf74Q6P047 294 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 NPAS3Q8IXF0 933 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 CCDC26Q8TAB7 109 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 MYEOVQ96EZ4 313 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 LRRC1Q9BTT6 524 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 STOML2Q9UJZ1 356 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 ZNF510Q9Y2H8 683 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 IGLV3-10A0A075B6K4 115 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 MCF2LO15068 1137 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 MFSD11O43934 449 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 RHOXF2BP0C7M4 288 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 RHOQP17081 205 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 IRAK1P51617 712 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 SLC10A2Q12908 348 aaPredicted RBP22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 TFAP2DQ7Z6R9 452 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 ZC3H18Q86VM9 953 aaKnown RBP22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 CFAP52Q8N1V2 620 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 CCDC33Q8N5R6 958 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 NETO2Q8NC67 525 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 SLC35B2Q8TB61 432 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 FGF13Q92913 245 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 PABPC5Q96DU9 382 aaKnown RBP22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 CCDC114Q96M63 670 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 RUNDC3BQ96NL0 473 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 RHOXF2Q9BQY4 288 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 DTLQ9NZJ0 730 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 ZNF148Q9UQR1 794 aa22.01■■□□□ 1.11
R3HCC1-208ENST00000522012 E2F8A0AVK6 867 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 H7C0C1 242 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 CNTN5O94779 1100 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 LTBRP36941 435 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 ATP5OP48047 213 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 VCPP55072 806 aaKnown RBP22■■□□□ 1.11
R3HCC1-208ENST00000522012 DR1Q01658 176 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 ERCC6LQ2NKX8 1250 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 ALFQ53S48 1182 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 RABGAP1LQ5R372 815 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 DRICH1Q6PGQ1 229 aaPredicted RBP22■■□□□ 1.11
R3HCC1-208ENST00000522012 BZW1Q7L1Q6 419 aaKnown RBP22■■□□□ 1.11
R3HCC1-208ENST00000522012 CIR1Q86X95 450 aaPredicted RBP22■■□□□ 1.11
R3HCC1-208ENST00000522012 BBS7Q8IWZ6 715 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 RTL3Q8N8U3 475 aaKnown RBP22■■□□□ 1.11
R3HCC1-208ENST00000522012 ATL2Q8NHH9 583 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 NKD2Q969F2 451 aaPredicted RBP22■■□□□ 1.11
R3HCC1-208ENST00000522012 RIPOR3Q96MK2 946 aa22■■□□□ 1.11
R3HCC1-208ENST00000522012 ZFP37Q9Y6Q3 630 aaPredicted RBP22■■□□□ 1.11
R3HCC1-208ENST00000522012 RAD51CO43502 376 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 RBP3P10745 1247 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 SERPINB6P35237 376 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 DARS2Q6PI48 645 aaKnown RBP21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 B4GALNT4Q76KP1 1039 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 MAATS1Q7Z4T9 603 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 NPWQ8N729 165 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 PRICKLE1Q96MT3 831 aaPredicted RBP21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 C10orf88Q9H8K7 445 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 PCYOX1Q9UHG3 505 aa21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 FEZ2Q9UHY8 353 aaPredicted RBP21.99■■□□□ 1.11
R3HCC1-208ENST00000522012 WASH4PA8MWX3 477 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 RPS24P62847 133 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 SLC7A5Q01650 507 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 DHX34Q14147 1143 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 NAA30Q147X3 362 aaPredicted RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 COL19A1Q14993 1142 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 KCTD19Q17RG1 926 aaPredicted RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 C5orf22Q49AR2 442 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 GLE1Q53GS7 698 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 FAM78AQ5JUQ0 283 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 GSTA5Q7RTV2 222 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 NLRP14Q86W24 1093 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 CELF5Q8N6W0 485 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 RIN3Q8TB24 985 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 CELF6Q96J87 481 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 MSLNLQ96KJ4 702 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 TMEM248Q9NWD8 314 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 GDE1Q9NZC3 331 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 DRG1Q9Y295 367 aaKnown RBP21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 ANAPC1Q9H1A4 1944 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 TRANK1O15050 2925 aa21.98■■□□□ 1.11
R3HCC1-208ENST00000522012 TTI1O43156 1089 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 ECEL1O95672 775 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 WEE1P30291 646 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 SGSHP51688 502 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms