RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 HIVEP1P15822 2718 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZFC3H1O60293 1989 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 TDRD6O60522 2096 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 H3BM21 787 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 BEST1O76090 585 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 KRT19P08727 400 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 CKMT1AP12532 417 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 TGM2P21980 687 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 GNL1P36915 607 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZBTB16Q05516 673 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 KCNA1Q09470 495 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 NCOA4Q13772 614 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 ANKS1BQ7Z6G8 1248 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 BRSK2Q8IWQ3 736 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 MYCT1Q8N699 235 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZMIZ2Q8NF64 920 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 OR5B17Q8NGF7 314 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 CYB5D2Q8WUJ1 264 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 UCMAQ8WVF2 138 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 HTR3CQ8WXA8 447 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 HPDLQ96IR7 371 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 FAM213AQ9BRX8 229 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 CIPCQ9C0C6 399 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 SLC25A18Q9H1K4 315 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 NEUROG2Q9H2A3 272 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 LRRC4CQ9HCJ2 640 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 PDE11AQ9HCR9 933 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 GEMIN8Q9NWZ8 242 aaKnown RBP9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 KCND2Q9NZV8 630 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 NUDT5Q9UKK9 219 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 PCDHGA8Q9Y5G5 932 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 ENTPD2Q9Y5L3 495 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 NAV3Q8IVL0 2385 aa9.31□□□□□ -0.92
TRAPPC9-212ENST00000521944 PDZD2O15018 2839 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 STC2O76061 302 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 DUSP3P51452 185 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 CYP4F2P78329 520 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 EIF4HQ15056 248 aaKnown RBP9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZRSR1Q15695 479 aaKnown RBP9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 SLFN12LQ6IEE8 588 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 USP53Q70EK8 1073 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 TMC6Q7Z403 805 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 ADIPOR2Q86V24 386 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 OR4C6Q8NH72 309 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 POMGNT1Q8WZA1 660 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 SAAL1Q96ER3 474 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 CCDC97Q96F63 343 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 STRA6Q9BX79 667 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 RSPH9Q9H1X1 276 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 PABPC3Q9H361 631 aaKnown RBP9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 NMUR1Q9HB89 426 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 RAB6BQ9NRW1 208 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 ARHGAP20Q9P2F6 1191 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 ODF2LQ9ULJ1 636 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 PLAAQ9Y263 795 aa9.3□□□□□ -0.92
TRAPPC9-212ENST00000521944 PRRC2CQ9Y520 2896 aaKnown RBP9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 HIVEP3Q5T1R4 2406 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 CYP26A1O43174 497 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 TIMM44O43615 452 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 PPFIA2O75334 1257 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 TACC1O75410 805 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 IL2RAP01589 272 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 DNTTP04053 509 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 CENPBP07199 599 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 RNF224P0DH78 156 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 SFTPCP11686 197 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 SCP2P22307 547 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 DGKAP23743 735 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 HLA-FP30511 346 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 ATP5C1P36542 298 aaKnown RBP9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 ATP1A2P50993 1020 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 INHBCP55103 352 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 ME3Q16798 604 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 TMEM119Q4V9L6 283 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 SGO2Q562F6 1265 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 USP30Q70CQ3 517 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 MFSD2AQ8NA29 543 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZNF564Q8TBZ8 553 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 CACTINQ8WUQ7 758 aaKnown RBP9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 SKA1Q96BD8 255 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 MYO19Q96H55 970 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 SERAC1Q96JX3 654 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 FUCA2Q9BTY2 467 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 GRIP2Q9C0E4 1043 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 NACA2Q9H009 215 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 ST6GALNAC4Q9H4F1 302 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 PARVGQ9HBI0 331 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 FBXL12Q9NXK8 326 aa9.29□□□□□ -0.92
TRAPPC9-212ENST00000521944 APCP25054 2843 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 A0A1W2PP55 124 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 GOLGA8IPA6NC78 632 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 VWA3AA6NCI4 1184 aa9.28□□□□□ -0.92
TRAPPC9-212ENST00000521944 GOLGA8JA6NMD2 632 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms