RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TUBA8Q9NY65 449 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 DNMT3BQ9UBC3 853 aaKnown RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 PI4KBQ9UBF8 816 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 CPNE7Q9UBL6 633 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 MGAT4CQ9UBM8 478 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 NKX1-2Q9UD57 310 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 PA2G4Q9UQ80 394 aaKnown RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 C4AP0C0L4 1744 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 MROH5Q6ZUA9 1318 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 SMIM35A0A1B0GVV1 85 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 KCNU1A8MYU2 1149 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 MOSPD3O75425 235 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 SURF6O75683 361 aaKnown RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 PIAS2O75928 621 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 VNN1O95497 513 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 MAP4K4O95819 1239 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 ZBED1O96006 694 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 MT-CO3P00414 261 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 CYP2A6P11509 494 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 CREB1P16220 341 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 TPH1P17752 444 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 PTDSS1P48651 473 aaKnown RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 GATMP50440 423 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 ALDH5A1P51649 535 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 TIRAPP58753 221 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 FMO1Q01740 532 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 CHRNDQ07001 517 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 HDAC1Q13547 482 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 UBE4AQ14139 1066 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 DAZAP2Q15038 168 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 KIAA0753Q2KHM9 967 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 SUPT20HL1Q3ZLR7 823 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 HSP90AB4PQ58FF6 505 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 RNASE12Q5GAN4 147 aaKnown RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 MZT2AQ6P582 158 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 OLFM4Q6UX06 510 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 ZDHHC24Q6UX98 284 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 C15orf52Q6ZUT6 534 aaKnown RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 ATG9AQ7Z3C6 839 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 BCDIN3DQ7Z5W3 292 aaKnown RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 GLCCI1Q86VQ1 547 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 TBC1D16Q8TBP0 767 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 CUL5Q93034 780 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 NAF1Q96HR8 494 aaKnown RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 MMS19Q96T76 1030 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 PSMD1Q99460 953 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 SH2D3AQ9BRG2 576 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 SIL1Q9H173 461 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 VPS33BQ9H267 617 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 TAOK3Q9H2K8 898 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 RWDD1Q9H446 243 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 DCTPP1Q9H773 170 aa3.74□□□□□ -1.81
VPS13B-209ENST00000521559 VIRMAQ69YN4 1812 aaKnown RBP3.74□□□□□ -1.81
VPS13B-209ENST00000521559 COL24A1Q17RW2 1714 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 NRXN2Q9P2S2 1712 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TUBGCP6Q96RT7 1819 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TCRBV5S1A1TA0A578 114 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 H7C4K7 107 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 PPEF2O14830 753 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 RRP9O43818 475 aaKnown RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 SNX2O60749 519 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TAF5LO75529 589 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 UFL1O94874 794 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 IFIT1P09914 478 aaKnown RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TXNP10599 105 aaKnown RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 MYF5P13349 255 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 FGFR2P21802 821 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 FPR3P25089 353 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 ACVR2AP27037 513 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 IL1R2P27930 398 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 KCNJ4P48050 445 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 CPT1AP50416 773 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 PRELPP51888 382 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 PGDP52209 483 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TIAL1Q01085 375 aaKnown RBP eCLIP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TFCP2Q12800 502 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 OS9Q13438 667 aaPredicted RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 LAMB3Q13751 1172 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 ZNF268Q14587 947 aaPredicted RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 PUM3Q15397 648 aaKnown RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 ETFDHQ16134 617 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 ST3GAL2Q16842 350 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 ZNF750Q32MQ0 723 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 ANO7Q6IWH7 933 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 SWSAP1Q6NVH7 229 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TMEM65Q6PI78 240 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 VSTM1Q6UX27 236 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 DPY19L3Q6ZPD9 716 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 CHST15Q7LFX5 561 aaPredicted RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 ERC1Q8IUD2 1116 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 C16orf71Q8IYS4 520 aaPredicted RBP3.73□□□□□ -1.81
VPS13B-209ENST00000521559 TTC8Q8TAM2 541 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 PIGOQ8TEQ8 1089 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 KIF1BPQ96EK5 621 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 VPS50Q96JG6 964 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 HS6ST2Q96MM7 605 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 EYA3Q99504 573 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 GPR108Q9NPR9 543 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 POLLQ9UGP5 575 aa3.73□□□□□ -1.81
VPS13B-209ENST00000521559 EXOC6BQ9Y2D4 811 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms