RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 SLC26A2P50443 739 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 IRX4P78413 519 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 MXRA7P84157 204 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 ZXDAP98168 799 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 OGDHQ02218 1023 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 SLC34A1Q06495 639 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 PRKD1Q15139 912 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 KIZQ2M2Z5 673 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 TRMT5Q32P41 509 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 WDR72Q3MJ13 1102 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 PTPN20Q4JDL3 420 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 CYP4A22Q5TCH4 519 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 TRIM68Q6AZZ1 485 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 DENND1BQ6P3S1 775 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 MTHFD1LQ6UB35 978 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 SCARA5Q6ZMJ2 495 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 C4orf50Q6ZRC1 276 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 ARCQ7LC44 396 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 LRRC6Q86X45 466 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 CRLF3Q8IUI8 442 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 GLIS1Q8NBF1 620 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 SMRP1Q8NCR6 262 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 CMASQ8NFW8 434 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 MZB1Q8WU39 189 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 TEKT4Q8WW24 435 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 ATP2A3Q93084 1043 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 TTC17Q96AE7 1141 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 FAF2Q96CS3 445 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 MRRFQ96E11 262 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 PTCD3Q96EY7 689 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 OXNAD1Q96HP4 312 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 ZNF668Q96K58 619 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 OSMRQ99650 979 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 ADAM2Q99965 735 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 CALN1Q9BXU9 219 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 RPF1Q9H9Y2 349 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 XAB2Q9HCS7 855 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 ENTPD7Q9NQZ7 604 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 TLR9Q9NR96 1032 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 DNAJB4Q9UDY4 337 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 CDH22Q9UJ99 828 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 DCTN4Q9UJW0 460 aa8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 CPSF3Q9UKF6 684 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-223ENST00000520520 TCRBV9S1A1TA0A576 114 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 M0QYV0 167 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 FCHO1O14526 889 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 AHCYL1O43865 530 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 FGF18O76093 207 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 STK10O94804 968 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 TMEM63AO94886 807 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 PSMG1O95456 288 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 CBX6O95503 412 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 TRUB2O95900 331 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 VTNP04004 478 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ERBB2P04626 1255 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 VDRP11473 427 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 PAX7P23759 505 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 RFC1P35251 1148 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ELK3P41970 407 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 MAGEA6P43360 314 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 GABRB2P47870 512 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 PTDSS1P48651 473 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ZNF143P52747 638 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 PTPN5P54829 565 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ERVFC1P60507 584 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 DPYSL3Q14195 570 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 KCNJ11Q14654 390 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 KPNB1Q14974 876 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 EFTUD2Q15029 972 aaKnown RBP eCLIP8.89□□□□□ -0.998e-9■■■□□ 15.7
CTNNA1-223ENST00000520520 RCN1Q15293 331 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 TARBP2Q15633 366 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ATP13A4Q4VNC1 1196 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 BOLA3Q53S33 107 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 HP1BP3Q5SSJ5 553 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 FNBP1LQ5T0N5 605 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 STXBP5Q5T5C0 1151 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 LRRC74BQ6ZQY2 392 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 NET1Q7Z628 596 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 XYLT1Q86Y38 959 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 TMPRSS6Q8IU80 811 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 FAM71DQ8N9W8 422 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 MCUQ8NE86 351 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 VN1R2Q8NFZ6 395 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 PPP1R14CQ8TAE6 165 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 TMEM40Q8WWA1 233 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 SREK1Q8WXA9 508 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 HSPH1Q92598 858 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ELMO3Q96BJ8 720 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 RTP4Q96DX8 246 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 MCRS1Q96EZ8 462 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ZBTB45Q96K62 511 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 TRAPPC9Q96Q05 1148 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 ACO2Q99798 780 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 PHF7Q9BWX1 381 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 BCO2Q9BYV7 579 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 HAPLN2Q9GZV7 340 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 KCNH6Q9H252 994 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 DENND2DQ9H6A0 471 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 GPAMQ9HCL2 828 aa8.89□□□□□ -0.99
CTNNA1-223ENST00000520520 PRMT7Q9NVM4 692 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms