RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PENKP01210 267 aaPredicted RBP18.35■□□□□ 0.53
SDC2-205ENST00000520233 ATP1A1P05023 1023 aaKnown RBP18.35■□□□□ 0.53
SDC2-205ENST00000520233 CYP17A1P05093 508 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 PYGMP11217 842 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 EPHB2P29323 1055 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 DNA2P51530 1060 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 SGSHP51688 502 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 COPS2P61201 443 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 RPS24P62847 133 aaKnown RBP18.35■□□□□ 0.53
SDC2-205ENST00000520233 NR1H3Q13133 447 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 MMRN1Q13201 1228 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 RUNX3Q13761 415 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 FYB2Q5VWT5 728 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 RWDD4Q6NW29 188 aaKnown RBP18.35■□□□□ 0.53
SDC2-205ENST00000520233 MFSD7Q6UXD7 560 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 SPOCD1Q6ZMY3 1216 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 CPA6Q8N4T0 437 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 DDI1Q8WTU0 396 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 FAF2Q96CS3 445 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 CSPG4P5Q96PW8 444 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 NAPGQ99747 312 aaPredicted RBP18.35■□□□□ 0.53
SDC2-205ENST00000520233 CATSPERBQ9H7T0 1116 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 ECT2Q9H8V3 914 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 STIM2Q9P246 746 aa18.35■□□□□ 0.53
SDC2-205ENST00000520233 CTAGE9A4FU28 777 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 KIF2AO00139 706 aaPredicted RBP18.34■□□□□ 0.53
SDC2-205ENST00000520233 ARNTLO00327 626 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 FGF10O15520 208 aaPredicted RBP18.34■□□□□ 0.53
SDC2-205ENST00000520233 DAPK3O43293 454 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 TBL1XO60907 577 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 ASGR2P07307 311 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 RHOQP17081 205 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 CETN2P41208 172 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 CDKN2BP42772 138 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 IRAK1P51617 712 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 CDH4P55283 916 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 GAD2Q05329 585 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 DPYSQ14117 519 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 TAZQ16635 292 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 ANKRD20A8PQ5CZ79 823 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 TFDP3Q5H9I0 405 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 DCAF12L1Q5VU92 463 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 RNF43Q68DV7 783 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 CHST9Q7L1S5 443 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 CCDC50Q8IVM0 306 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 CFAP52Q8N1V2 620 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 BBS2Q9BXC9 721 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 CARD9Q9H257 536 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 TRPV5Q9NQA5 729 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 MPP6Q9NZW5 540 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 DNAI1Q9UI46 699 aa18.34■□□□□ 0.53
SDC2-205ENST00000520233 A0A1B0GVM2 712 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 TCAF2A6NFQ2 919 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 WASH4PA8MWX3 477 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 ESPNB1AK53 854 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 KCNK3O14649 394 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 HOXC11O43248 304 aaPredicted RBP18.33■□□□□ 0.52
SDC2-205ENST00000520233 CLDN11O75508 207 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 CNTN5O94779 1100 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 ADH5P11766 374 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 ERCC2P18074 760 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 HOXD9P28356 352 aaPredicted RBP18.33■□□□□ 0.52
SDC2-205ENST00000520233 CASQ1P31415 396 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 PTPN7P35236 360 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 TNK2Q07912 1038 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 TDGQ13569 410 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 PPP2R5EQ16537 467 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 ANO4Q32M45 955 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 ALFQ53S48 1182 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 PAPD7Q5XG87 772 aaKnown RBP18.33■□□□□ 0.52
SDC2-205ENST00000520233 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 ANKS1BQ7Z6G8 1248 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 NLRP14Q86W24 1093 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 PCDH19Q8TAB3 1148 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 P2RY11Q96G91 374 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 RNF157Q96PX1 679 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 PRDM16Q9HAZ2 1276 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 TMEM248Q9NWD8 314 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 SNX12Q9UMY4 172 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 EFR3BQ9Y2G0 817 aa18.33■□□□□ 0.52
SDC2-205ENST00000520233 hCG_1818297A0A087WSY0 165 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 NEDD8-MDP1E9PL57 170 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 FANCGO15287 622 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 TYRP14679 529 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 PRLRP16471 622 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 AMPD1P23109 780 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 ZNF211Q13398 564 aaPredicted RBP18.32■□□□□ 0.52
SDC2-205ENST00000520233 ITPRIPL2Q3MIP1 535 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 SEL1L2Q5TEA6 688 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 CIR1Q86X95 450 aaPredicted RBP18.32■□□□□ 0.52
SDC2-205ENST00000520233 RTL3Q8N8U3 475 aaKnown RBP18.32■□□□□ 0.52
SDC2-205ENST00000520233 CSGALNACT1Q8TDX6 532 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 DNASE1L2Q92874 299 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 PBKQ96KB5 322 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 PSMB7Q99436 277 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 MAK16Q9BXY0 300 aaKnown RBP18.32■□□□□ 0.52
SDC2-205ENST00000520233 ARHGEF4Q9NR80 690 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 DONSONQ9NYP3 566 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 PLK2Q9NYY3 685 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 GTSE1Q9NYZ3 720 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms