RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 RDXP35241 583 aaKnown RBP26.21■■□□□ 1.79
VEGFA-220ENST00000519767 CSKP41240 450 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 RPS14P62263 151 aaKnown RBP26.21■■□□□ 1.79
VEGFA-220ENST00000519767 EIF4EBP2Q13542 120 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-220ENST00000519767 TTC31Q49AM3 519 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-220ENST00000519767 FAM124AQ86V42 546 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 LGI2Q8N0V4 545 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 CFAP52Q8N1V2 620 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 ZNF366Q8N895 744 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 DNAJC12Q9UKB3 198 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 CKAP5Q14008 2032 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 RNASEH1O60930 286 aaKnown RBP26.2■■□□□ 1.78
VEGFA-220ENST00000519767 HSF2BPO75031 334 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 SRPRAP08240 638 aaKnown RBP26.2■■□□□ 1.78
VEGFA-220ENST00000519767 CD59P13987 128 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 ABCB4P21439 1286 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 TACR2P21452 398 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 APBA1Q02410 837 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 FOXC1Q12948 553 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 SLC12A1Q13621 1099 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 TAF5Q15542 800 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 HNRNPA1L2Q32P51 320 aaKnown RBP26.2■■□□□ 1.78
VEGFA-220ENST00000519767 ZNF776Q68DI1 518 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-220ENST00000519767 IL27RAQ6UWB1 636 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 CACUL1Q86Y37 369 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 MYEOVQ96EZ4 313 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 SLC2A13Q96QE2 648 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 CPXM1Q96SM3 734 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 BTBD1Q9H0C5 482 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 RSPH9Q9H1X1 276 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-220ENST00000519767 NDST4Q9H3R1 872 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 INTS6Q9UL03 887 aaKnown RBP26.2■■□□□ 1.78
VEGFA-220ENST00000519767 NCKAP1Q9Y2A7 1128 aa26.2■■□□□ 1.78
VEGFA-220ENST00000519767 USP24Q9UPU5 2620 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 TARSL2A2RTX5 802 aaKnown RBP26.19■■□□□ 1.78
VEGFA-220ENST00000519767 F5H5T6 163 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 FOXN3O00409 490 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-220ENST00000519767 GJB3O75712 270 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 CCR1P32246 355 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 VWA3BQ502W6 1294 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 FSCBQ5H9T9 825 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 CT47A1Q5JQC4 288 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-220ENST00000519767 PITRM1Q5JRX3 1037 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 RAP1GAP2Q684P5 730 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 C11orf57Q6ZUT1 292 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-220ENST00000519767 CHSY1Q86X52 802 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 DEFB106AQ8N104 65 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 ZCCHC9Q8N567 271 aaKnown RBP26.19■■□□□ 1.78
VEGFA-220ENST00000519767 C1orf216Q8TAB5 229 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 RNF34Q969K3 372 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 MYO19Q96H55 970 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 FAM204AQ9H8W3 233 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 SGK2Q9HBY8 427 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 SIX2Q9NPC8 291 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 EIF2B4Q9UI10 523 aaKnown RBP26.19■■□□□ 1.78
VEGFA-220ENST00000519767 XPO7Q9UIA9 1087 aaKnown RBP26.19■■□□□ 1.78
VEGFA-220ENST00000519767 WASF3Q9UPY6 502 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 ERVW-1Q9UQF0 538 aa26.19■■□□□ 1.78
VEGFA-220ENST00000519767 ACSL1P33121 698 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 OXCT1P55809 520 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 SIM1P81133 766 aaPredicted RBP26.18■■□□□ 1.78
VEGFA-220ENST00000519767 ECT2LQ008S8 904 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 GRIK2Q13002 908 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 TTC39BQ5VTQ0 682 aaPredicted RBP26.18■■□□□ 1.78
VEGFA-220ENST00000519767 USP30Q70CQ3 517 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 OR2I1PQ8NGU4 316 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 MRGPRX3Q96LB0 322 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 PPP1R9BQ96SB3 815 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 TUBGCP2Q9BSJ2 902 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 OSGEPQ9NPF4 335 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 CEP83Q9Y592 693 aa26.18■■□□□ 1.78
VEGFA-220ENST00000519767 TRIM16O95361 564 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 SEMA4FO95754 770 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 CLCN1P35523 988 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 RABGAP1LQ5R372 815 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 OR6B2Q6IFH4 312 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 ZDHHC17Q8IUH5 632 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 FAM71AQ8IYT1 594 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 C6orf106Q9H6K1 298 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-220ENST00000519767 SYNCQ9H7C4 482 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 TMEM51Q9NW97 253 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 DDIT4Q9NX09 232 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-220ENST00000519767 FRYQ5TBA9 3013 aa26.17■■□□□ 1.78
VEGFA-220ENST00000519767 NNMTP40261 264 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 AFF3P51826 1226 aaKnown RBP26.16■■□□□ 1.78
VEGFA-220ENST00000519767 SLC6A3Q01959 620 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 SULT2A1Q06520 285 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 RNF219Q5W0B1 726 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-220ENST00000519767 MMS22LQ6ZRQ5 1243 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 PASD1Q8IV76 773 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 PRMT1Q99873 361 aaKnown RBP26.16■■□□□ 1.78
VEGFA-220ENST00000519767 NUP62CLQ9H1M0 184 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 RRN3Q9NYV6 651 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 PCDH15Q96QU1 1955 aa26.16■■□□□ 1.78
VEGFA-220ENST00000519767 EDDM13A0A1B0GTR0 161 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 SPAARA0A1B0GVQ0 90 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 CER1O95813 267 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 ZNF883P0CG24 379 aa26.15■■□□□ 1.78
VEGFA-220ENST00000519767 PITX1P78337 314 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms