RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 RSPH9Q9H1X1 276 aaPredicted RBP12.89□□□□□ -0.35
CSMD1-205ENST00000519623 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
CSMD1-205ENST00000519623 IL21RQ9HBE5 538 aa12.89□□□□□ -0.35
CSMD1-205ENST00000519623 POPDC2Q9HBU9 364 aa12.89□□□□□ -0.35
CSMD1-205ENST00000519623 TJP2Q9UDY2 1190 aa12.89□□□□□ -0.35
CSMD1-205ENST00000519623 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.89□□□□□ -0.35
CSMD1-205ENST00000519623 NEUROG3Q9Y4Z2 214 aa12.89□□□□□ -0.35
CSMD1-205ENST00000519623 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 ASPMQ8IZT6 3477 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 FAM221BA6H8Z2 402 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 CAPN9O14815 690 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 CBFA2T3O75081 653 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
CSMD1-205ENST00000519623 SEMA4FO95754 770 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 TRUB2O95900 331 aaKnown RBP12.88□□□□□ -0.35
CSMD1-205ENST00000519623 MOCS2O96007 188 aaPredicted RBP12.88□□□□□ -0.35
CSMD1-205ENST00000519623 PON1P27169 355 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 CTSOP43234 321 aaPredicted RBP12.88□□□□□ -0.35
CSMD1-205ENST00000519623 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
CSMD1-205ENST00000519623 UBE2HP62256 183 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 PDCLQ13371 301 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 HLA-BQ31612 363 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 HNRNPA1L2Q32P51 320 aaKnown RBP12.88□□□□□ -0.35
CSMD1-205ENST00000519623 PITRM1Q5JRX3 1037 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 C9orf64Q5T6V5 341 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 DBX2Q6ZNG2 339 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 CREBRFQ8IUR6 639 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 LGI2Q8N0V4 545 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 CHCHD4Q8N4Q1 142 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 KDM1BQ8NB78 822 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 SHC3Q92529 594 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 BIRC7Q96CA5 298 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 BTN2A3PQ96KV6 586 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 FAM81BQ96LP2 452 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 BTBD1Q9H0C5 482 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 GAREM1Q9H706 876 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 OSGEPQ9NPF4 335 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 KLK13Q9UKR3 277 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 ERVW-1Q9UQF0 538 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
CSMD1-205ENST00000519623 A0A1B0GVT2 93 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 KCNU1A8MYU2 1149 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 H0Y626 953 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 SIN3BO75182 1162 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 TRIM16O95361 564 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 APOEP02649 317 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 DNTTP04053 509 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 ASLP04424 464 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 ZNF883P0CG24 379 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 TACR2P21452 398 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 USP8P40818 1118 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 EXOC3L4Q17RC7 722 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 RAP1GAP2Q684P5 730 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 ZNF776Q68DI1 518 aaPredicted RBP12.87□□□□□ -0.35
CSMD1-205ENST00000519623 DPY19L2P1Q6NXN4 242 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
CSMD1-205ENST00000519623 NAXDQ8IW45 347 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 APCDD1Q8J025 514 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 SLC2A13Q96QE2 648 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 CPXM1Q96SM3 734 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 FAM129BQ96TA1 746 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 PRMT1Q99873 361 aaKnown RBP12.87□□□□□ -0.35
CSMD1-205ENST00000519623 ORAI3Q9BRQ5 295 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 SGK2Q9HBY8 427 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 SIX2Q9NPC8 291 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSMD1-205ENST00000519623 KIAA1522Q9P206 1035 aaPredicted RBP12.87□□□□□ -0.35
CSMD1-205ENST00000519623 SLCO3A1Q9UIG8 710 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 ZMIZ1Q9ULJ6 1067 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
CSMD1-205ENST00000519623 FNDC3AQ9Y2H6 1198 aaKnown RBP12.87□□□□□ -0.35
CSMD1-205ENST00000519623 ZFHX4Q86UP3 3567 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 ZZEF1O43149 2961 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 TYW5A2RUC4 315 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 GTPBP10A4D1E9 387 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 TTC34A8MYJ7 566 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 C10orf142B7Z368 130 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 GLI1P08151 1106 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 SRPRAP08240 638 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 CD27P26842 260 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 RDXP35241 583 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 CLCN1P35523 988 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 MATKP42679 507 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 AFF3P51826 1226 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 ST8SIA6P61647 398 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 ECT2LQ008S8 904 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 CDH18Q13634 790 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 KIF19Q2TAC6 998 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 SMYD5Q6GMV2 418 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 IL27RAQ6UWB1 636 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 CHSY1Q86X52 802 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms