RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 CPA2P48052 419 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 HK3P52790 923 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 RRP1P56182 461 aaKnown RBP3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 AMPD3Q01432 767 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PPIL2Q13356 520 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PTPN21Q16825 1174 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ZNF750Q32MQ0 723 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 LONRF3Q496Y0 759 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CCDC174Q6PII3 467 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 COPS6Q7L5N1 327 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 LIX1LQ8IVB5 337 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 FBXL14Q8N1E6 418 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PRR18Q8N4B5 295 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PRPF38AQ8NAV1 312 aaKnown RBP3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CCDC191Q8NCU4 936 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SOCS4Q8WXH5 440 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MED30Q96HR3 178 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 P2RX7Q99572 595 aaKnown RBP3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MRPL46Q9H2W6 279 aaKnown RBP3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SEMA4BQ9NPR2 832 aaPredicted RBP3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TMOD2Q9NZR1 351 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 AMFRQ9UKV5 643 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ZDHHC8Q9ULC8 765 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 UNC80Q8N2C7 3258 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SCN11AQ9UI33 1791 aa3.38□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SLC16A6O15403 523 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MT-CO3P00414 261 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PCCAP05165 728 aaPredicted RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 U2AF1L5P0DN76 240 aaPredicted RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PDCP20941 246 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 THBS4P35443 961 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 IGHMBP2P38935 993 aaKnown RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 COPB1P53618 953 aaKnown RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 LILRA4P59901 499 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MRPS5P82675 430 aaKnown RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 U2AF1Q01081 240 aaKnown RBP eCLIP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CALD1Q05682 793 aaKnown RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 STIM1Q13586 685 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 DEPDC1Q5TB30 811 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ZNF793Q6ZN11 406 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MOB2Q70IA6 237 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 HEATR3Q7Z4Q2 680 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MIER2Q8N344 545 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 NGEFQ8N5V2 710 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SIRT6Q8N6T7 355 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TBC1D22AQ8WUA7 517 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 BRI3BPQ8WY22 251 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CELF1Q92879 486 aaKnown RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TNPO1Q92973 898 aaKnown RBP3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ISCA1Q9BUE6 129 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ARHGAP39Q9C0H5 1083 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 C11orf49Q9H6J7 331 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 WDCPQ9H6R7 721 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ABCF2Q9UG63 623 aa3.37□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ALG1L2C9J202 215 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PDHXO00330 501 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CES2O00748 559 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TNPO2O14787 897 aaKnown RBP3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 KCNQ3O43525 872 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SOCS5O75159 536 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ZNF432O94892 652 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PLGP00747 810 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 IL1R1P14778 569 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 FOSL2P15408 326 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 RHCEP18577 417 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 KCNJ4P48050 445 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PIP4K2AP48426 406 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PGGT1BP53609 377 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 GAS1P54826 345 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 NEXNQ0ZGT2 675 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 VGLL4Q14135 290 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 IQCB1Q15051 598 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SEC23BQ15437 767 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CYP1B1Q16678 543 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 RNF187Q5TA31 235 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 THEMIS2Q5TEJ8 643 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 RANBP10Q6VN20 620 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 DPY19L3Q6ZPD9 716 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MCM10Q7L590 875 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PPP1R3BQ86XI6 285 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SPATA2LQ8IUW3 424 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SFTPA1Q8IWL2 248 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SNX27Q96L92 541 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 DEFB118Q96PH6 123 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MPHOSPH8Q99549 860 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PLSCR4Q9NRQ2 329 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 HESX1Q9UBX0 185 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TSPYL4Q9UJ04 414 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 OGDHLQ9ULD0 1010 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MAFFQ9ULX9 164 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ASTN2O75129 1339 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MAPK8IP3Q9UPT6 1336 aa3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 RPAP1Q9BWH6 1393 aaPredicted RBP3.36□□□□□ -1.87
ATP6V1C1-204ENST00000518959 COL2A1P02458 1487 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 FOXN3O00409 490 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 DCLK1O15075 740 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ERC2O15083 957 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MAP4K4O95819 1239 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms