RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 EXOC1Q9NV70 894 aa5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 TRMT1Q9NXH9 659 aaKnown RBP5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 FAM53CQ9NYF3 392 aa5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 DDX25Q9UHL0 483 aaKnown RBP5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 MID2Q9UJV3 735 aa5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 SLC45A2Q9UMX9 530 aa5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 NR2E1Q9Y466 385 aa5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 ITIH6Q6UXX5 1313 aa5.2□□□□□ -1.58
CTNNA1-212ENST00000518919 GOLGB1Q14789 3259 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 KCNJ18B7U540 433 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 EIF3FO00303 357 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 DYNC1I1O14576 645 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 PIP5K1BO14986 540 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 PJA2O43164 708 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 MFAP3LO75121 409 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 AMHP03971 560 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 GYPCP04921 128 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 FCER1AP12319 257 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 IL1R2P27930 398 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 CCT6AP40227 531 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 MRPL12P52815 198 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 CLRN1P58418 232 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 SPAG1Q07617 926 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 DLX2Q07687 328 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 STK4Q13043 487 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 DUSP8Q13202 625 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 MRPL49Q13405 166 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 PTK2BQ14289 1009 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 KCNJ12Q14500 433 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 TIGD6Q17RP2 521 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 TMEM266Q2M3C6 531 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 USH1GQ495M9 461 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 TCP11X2Q5H9J9 407 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 CRB2Q5IJ48 1285 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 MCTP2Q6DN12 878 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 JMJD6Q6NYC1 403 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 MOXD1Q6UVY6 613 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 FAM83AQ86UY5 434 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 GALNT15Q8N3T1 639 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 FBXO15Q8NCQ5 510 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 NAXEQ8NCW5 288 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 STYXQ8WUJ0 223 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 LARP4BQ92615 738 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 MS4A7Q9GZW8 240 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 SIK2Q9H0K1 926 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 GLT8D2Q9H1C3 349 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 VPS33BQ9H267 617 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 TAOK3Q9H2K8 898 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 RANBP17Q9H2T7 1088 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 VCPKMTQ9H867 229 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 GPR35Q9HC97 309 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 HEYLQ9NQ87 328 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 NECTIN3Q9NQS3 549 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 RGL1Q9NZL6 768 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 LRWD1Q9UFC0 647 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 FER1L6Q2WGJ9 1857 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 ASTN2O75129 1339 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 MYH7BA7E2Y1 1941 aa5.19□□□□□ -1.58
CTNNA1-212ENST00000518919 CDHR4A6H8M9 788 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 AKR1B15C9JRZ8 316 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 FAM86B1E9PN63 330 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 PSMA7O14818 248 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 CTIFO43310 598 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 MED24O75448 989 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 INMTO95050 263 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 CNOT4O95628 575 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 CHEK2O96017 543 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 POMCP01189 267 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 PYGLP06737 847 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 FAM86B2P0C5J1 330 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 PIM1P11309 404 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 BDNFP23560 247 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 CCNE1P24864 410 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 ACVR2AP27037 513 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 GABRB3P28472 473 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 HOXA13P31271 388 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 CIITAP33076 1130 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 COPAP53621 1224 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 TGFB2P61812 414 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 FOXD4Q12950 439 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 COASYQ13057 564 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 IKQ13123 557 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 NFYCQ13952 458 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 SIM2Q14190 667 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 PDIA5Q14554 519 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 MTF1Q14872 753 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 FAM214AQ32MH5 1076 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 Q4G0T1 1027 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 KRT79Q5XKE5 535 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 RAD9BQ6WBX8 426 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 LRRC55Q6ZSA7 311 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 MAATS1Q7Z4T9 603 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 FRMD5Q7Z6J6 570 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 ADGRE4PQ86SQ3 457 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 USP37Q86T82 979 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 GATAD2AQ86YP4 633 aa5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 SUGP1Q8IWZ8 645 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-212ENST00000518919 GLIS1Q8NBF1 620 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms