RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 HOXC11O43248 304 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-207ENST00000518716 GREM1O60565 184 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 APODP05090 189 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 ACAT1P24752 427 aaKnown RBP6.39□□□□□ -1.39
PABPC1-207ENST00000518716 PRPHP41219 470 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 ACOT2P49753 483 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 LIG4P49917 911 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 PDE6CP51160 858 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 GTF2BQ00403 316 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TSPY1Q01534 308 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 GRIK2Q13002 908 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 ORC1Q13415 861 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 KCNB1Q14721 858 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 ANKRD1Q15327 319 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 SF3A1Q15459 793 aaKnown RBP6.39□□□□□ -1.39
PABPC1-207ENST00000518716 SOWAHAQ2M3V2 549 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TMEM119Q4V9L6 283 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 KRT79Q5XKE5 535 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 VSTM1Q6UX27 236 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TTC30AQ86WT1 665 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 SPACA3Q8IXA5 215 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TMEM86AQ8N2M4 240 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 ZNF843Q8N446 348 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 OTUD6BQ8N6M0 293 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 FBXO18Q8NFZ0 1043 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 HSPA12BQ96MM6 686 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 FAM129BQ96TA1 746 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TCF12Q99081 682 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 MSTO1Q9BUK6 570 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 STRA6Q9BX79 667 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 FAM124BQ9H5Z6 455 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-207ENST00000518716 IL21RQ9HBE5 538 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 CD93Q9NPY3 652 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 ARHGEF4Q9NR80 690 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TMEM30AQ9NV96 361 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 DDX43Q9NXZ2 648 aaKnown RBP6.39□□□□□ -1.39
PABPC1-207ENST00000518716 LARSQ9P2J5 1176 aaKnown RBP6.39□□□□□ -1.39
PABPC1-207ENST00000518716 PCDHB6Q9Y5E3 794 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 PCDHGB2Q9Y5G2 931 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 RAI2Q9Y5P3 530 aa6.39□□□□□ -1.39
PABPC1-207ENST00000518716 TCHHQ07283 1943 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 E2F8A0AVK6 867 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-207ENST00000518716 E9PAM4 449 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 LAD1O00515 517 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 TRIM24O15164 1050 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 ATP2C2O75185 946 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 ZNF217O75362 1048 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 TULP3O75386 442 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 PLA2G4BP0C869 781 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 ITPKBP27987 946 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 NTSR1P30989 418 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 PNPLA4P41247 253 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 PPP3CCP48454 512 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 NOP14P78316 857 aaKnown RBP6.38□□□□□ -1.39
PABPC1-207ENST00000518716 GUCY1B3Q02153 619 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 RESTQ13127 1097 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 TRIM29Q14134 588 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 SV2CQ496J9 727 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 LY6G5CQ5SRR4 150 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 SNX30Q5VWJ9 437 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 LARP1BQ659C4 914 aaKnown RBP6.38□□□□□ -1.39
PABPC1-207ENST00000518716 TRMT11Q7Z4G4 463 aaKnown RBP6.38□□□□□ -1.39
PABPC1-207ENST00000518716 TOP6BLQ8N6T0 577 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 LRRC52Q8N7C0 313 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 ZNF513Q8N8E2 541 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-207ENST00000518716 FSIP1Q8NA03 581 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 TERB1Q8NA31 727 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 KBTBD7Q8WVZ9 684 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 OTUB2Q96DC9 234 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 MRGPRX1Q96LB2 322 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 ACOX2Q99424 681 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 REEP2Q9BRK0 252 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 IKZF4Q9H2S9 585 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 ST6GALNAC4Q9H4F1 302 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 CRTAC1Q9NQ79 661 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 TRPM5Q9NZQ8 1165 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 SUSD2Q9UGT4 822 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 SIX4Q9UIU6 781 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 ODF2LQ9ULJ1 636 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 NME7Q9Y5B8 376 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 CPQQ9Y646 472 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 BSNQ9UPA5 3926 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 AHCTF1Q8WYP5 2266 aa6.38□□□□□ -1.39
PABPC1-207ENST00000518716 USP9XQ93008 2570 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-207ENST00000518716 A0A1B0GTW7 788 aa6.37□□□□□ -1.39
PABPC1-207ENST00000518716 TBC1D3BA6NDS4 549 aa6.37□□□□□ -1.39
PABPC1-207ENST00000518716 TCAF2A6NFQ2 919 aa6.37□□□□□ -1.39
PABPC1-207ENST00000518716 EIF4E1BA6NMX2 242 aaKnown RBP6.37□□□□□ -1.39
PABPC1-207ENST00000518716 ETV2O00321 342 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-207ENST00000518716 SCAMP3O14828 347 aaKnown RBP6.37□□□□□ -1.39
PABPC1-207ENST00000518716 TLX3O43711 291 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-207ENST00000518716 NUAK1O60285 661 aa6.37□□□□□ -1.39
PABPC1-207ENST00000518716 CILPO75339 1184 aa6.37□□□□□ -1.39
PABPC1-207ENST00000518716 IGLV3-19P01714 112 aa6.37□□□□□ -1.39
PABPC1-207ENST00000518716 CISD3P0C7P0 127 aa6.37□□□□□ -1.39
PABPC1-207ENST00000518716 HOXB2P14652 356 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms