RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 LMLNQ96KR4 655 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 DEF6Q9H4E7 631 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 MRPL47Q9HD33 250 aaKnown RBP22.71■■□□□ 1.23
VEGFA-217ENST00000518538 TMPRSS4Q9NRS4 437 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 POLR3BQ9NW08 1133 aaPredicted RBP22.71■■□□□ 1.23
VEGFA-217ENST00000518538 A0A1B0GVM2 712 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 TCAF2A6NFQ2 919 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 TMEM191CA6NGB0 347 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 SGK1O00141 431 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 HNRNPLP14866 589 aaKnown RBP eCLIP22.7■■□□□ 1.22
VEGFA-217ENST00000518538 OGDHQ02218 1023 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 E2F5Q15329 346 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 SLC18A3Q16572 532 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 ASTE1Q2TB18 679 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-217ENST00000518538 TMEM215Q68D42 235 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 CHST9Q7L1S5 443 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 C14orf80Q86SX3 495 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 ZNF683Q8IZ20 524 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 CCAR2Q8N163 923 aaKnown RBP22.7■■□□□ 1.22
VEGFA-217ENST00000518538 CAMKK1Q8N5S9 505 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 FNIP1Q8TF40 1166 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 ZDHHC4Q9NPG8 344 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 ZSCAN32Q9NX65 697 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 ELOVL2Q9NXB9 296 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 MYO1AQ9UBC5 1043 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 MUC6Q6W4X9 2439 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 WDFY4Q6ZS81 3184 aa22.7■■□□□ 1.22
VEGFA-217ENST00000518538 H0Y626 953 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 NPC1O15118 1278 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 ADAM23O75077 832 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 PSMA2P25787 234 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 NTSR1P30989 418 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 CD70P32970 193 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 ADRA1BP35368 520 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 GFPT1Q06210 699 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-217ENST00000518538 LMAN2Q12907 356 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 CRY1Q16526 586 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 ZC3H14Q6PJT7 736 aaKnown RBP22.69■■□□□ 1.22
VEGFA-217ENST00000518538 LRRC31Q6UY01 552 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 ADIPOR2Q86V24 386 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 CIR1Q86X95 450 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-217ENST00000518538 CHPFQ8IZ52 775 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 NTAN1Q96AB6 310 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 HHIPQ96QV1 700 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 CHP1Q99653 195 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 CIPCQ9C0C6 399 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 THAP2Q9H0W7 228 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 FAM86C1Q9NVL1 165 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 KIAA1522Q9P206 1035 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-217ENST00000518538 PCDHGA2Q9Y5H1 932 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 SNX10Q9Y5X0 201 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 ATG2BQ96BY7 2078 aa22.69■■□□□ 1.22
VEGFA-217ENST00000518538 IRAK1P51617 712 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 DGKEP52429 567 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 FSCBQ5H9T9 825 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 SDE2Q6IQ49 451 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 CCDC185Q8N715 623 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 TC2NQ8N9U0 490 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 ZBTB44Q8NCP5 570 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 ACOX2Q99424 681 aa22.68■■□□□ 1.22
VEGFA-217ENST00000518538 NHEJ1Q9H9Q4 299 aaPredicted RBP22.68■■□□□ 1.22
VEGFA-217ENST00000518538 THAP10Q9P2Z0 257 aaPredicted RBP22.68■■□□□ 1.22
VEGFA-217ENST00000518538 IGLV3-10A0A075B6K4 115 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 DRGXA6NNA5 263 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 E9PAM4 449 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 AKR1B10O60218 316 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 CLDN11O75508 207 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 APBB3O95704 486 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 CYP1A2P05177 515 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 HOXC13P31276 330 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 NBL1P41271 181 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 GALCP54803 685 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 CDH4P55283 916 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 OXCT1P55809 520 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 NRG1Q02297 640 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-217ENST00000518538 SCAPQ12770 1279 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 FUT11Q495W5 492 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 MBLAC2Q68D91 279 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 TMEM92Q6UXU6 159 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 TSTD1Q8NFU3 115 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 CCDC42Q96M95 316 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 GABRG3Q99928 467 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 TRIM7Q9C029 511 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 OSBPL2Q9H1P3 480 aa22.67■■□□□ 1.22
VEGFA-217ENST00000518538 CCDC163A0A0D9SF12 145 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 HOXB2P14652 356 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 POLR2EP19388 210 aaKnown RBP22.66■■□□□ 1.22
VEGFA-217ENST00000518538 FNTBP49356 437 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 AIF1P55008 147 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 DMWDQ09019 674 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 ZNF252P-AS1Q0IIN9 211 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 SLC12A1Q13621 1099 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 ENPP2Q13822 863 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 ZNF234Q14588 700 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 ARTNQ5T4W7 220 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 HEATR6Q6AI08 1181 aaKnown RBP22.66■■□□□ 1.22
VEGFA-217ENST00000518538 CXorf57Q6NSI4 855 aaKnown RBP22.66■■□□□ 1.22
VEGFA-217ENST00000518538 SCYL2Q6P3W7 929 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 SLFN11Q7Z7L1 901 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 LONP2Q86WA8 852 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms