RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 SLC6A14Q9UN76 642 aa19.2■□□□□ 0.66
HOXA3-203ENST00000518451 PAXBP1Q9Y5B6 917 aa19.2■□□□□ 0.66
HOXA3-203ENST00000518451 SYNJ2BP-COX16A0A087WUM0 186 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 C4orf47A7E2U8 309 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 PATE3B3GLJ2 98 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 F8VZ95 297 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 TM4SF5O14894 197 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 DAB1O75553 588 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 GRAP2O75791 330 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 F9P00740 461 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 GNSP15586 552 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 SCNN1AP37088 669 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 MATKP42679 507 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 GABRB2P47870 512 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 TPMTP51580 245 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 COPAP53621 1224 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 ZBTB16Q05516 673 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 SFSWAPQ12872 951 aaKnown RBP19.19■□□□□ 0.66
HOXA3-203ENST00000518451 SLC12A1Q13621 1099 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 PTPRNQ16849 979 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 PTPN20Q4JDL3 420 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 SND1Q7KZF4 910 aaKnown RBP eCLIP19.19■□□□□ 0.66
HOXA3-203ENST00000518451 RGL4Q8IZJ4 473 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 TOE1Q96GM8 510 aaKnown RBP19.19■□□□□ 0.66
HOXA3-203ENST00000518451 HSPA12BQ96MM6 686 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 NAT10Q9H0A0 1025 aaKnown RBP19.19■□□□□ 0.66
HOXA3-203ENST00000518451 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.19■□□□□ 0.66
HOXA3-203ENST00000518451 COX16Q9P0S2 106 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 SUSD2Q9UGT4 822 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 THADAQ6YHU6 1953 aa19.19■□□□□ 0.66
HOXA3-203ENST00000518451 M0QYT0 321 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 IGLV3-19P01714 112 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 CFIP05156 583 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 SERPINF2P08697 491 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 HLA-EP13747 358 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 ATXN3P54252 364 aaPredicted RBP19.18■□□□□ 0.66
HOXA3-203ENST00000518451 PITX1P78337 314 aaPredicted RBP19.18■□□□□ 0.66
HOXA3-203ENST00000518451 GFPT1Q06210 699 aaPredicted RBP19.18■□□□□ 0.66
HOXA3-203ENST00000518451 NME3Q13232 169 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 ACBD5Q5T8D3 534 aaPredicted RBP19.18■□□□□ 0.66
HOXA3-203ENST00000518451 TAF3Q5VWG9 929 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 WFDC5Q8TCV5 224 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 LMLNQ96KR4 655 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 PCMTD1Q96MG8 357 aaPredicted RBP19.18■□□□□ 0.66
HOXA3-203ENST00000518451 SPAG5Q96R06 1193 aa19.18■□□□□ 0.66
HOXA3-203ENST00000518451 XPO7Q9UIA9 1087 aaKnown RBP19.18■□□□□ 0.66
HOXA3-203ENST00000518451 LRRC10BA6NIK2 292 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 RNASEH1O60930 286 aaKnown RBP19.17■□□□□ 0.66
HOXA3-203ENST00000518451 DNTTP04053 509 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 SRPRAP08240 638 aaKnown RBP19.17■□□□□ 0.66
HOXA3-203ENST00000518451 NNMTP40261 264 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 CSKP41240 450 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 RNASE9P60153 205 aaKnown RBP19.17■□□□□ 0.66
HOXA3-203ENST00000518451 POLR2FP61218 127 aaKnown RBP19.17■□□□□ 0.66
HOXA3-203ENST00000518451 RNF219Q5W0B1 726 aaPredicted RBP19.17■□□□□ 0.66
HOXA3-203ENST00000518451 SLC41A1Q8IVJ1 513 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 GPR174Q9BXC1 333 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 PCED1AQ9H1Q7 454 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 WDCPQ9H6R7 721 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 PRSS16Q9NQE7 514 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 FAM207AQ9NSI2 230 aaPredicted RBP19.17■□□□□ 0.66
HOXA3-203ENST00000518451 LIMA1Q9UHB6 759 aaKnown RBP19.17■□□□□ 0.66
HOXA3-203ENST00000518451 SCML1Q9UN30 329 aa19.17■□□□□ 0.66
HOXA3-203ENST00000518451 SYPP08247 313 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 C7P10643 843 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 STAT1P42224 750 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 COPB1P53618 953 aaKnown RBP19.16■□□□□ 0.66
HOXA3-203ENST00000518451 ECT2LQ008S8 904 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 SULT2A1Q06520 285 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 ARID5BQ14865 1188 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 FSCBQ5H9T9 825 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 PITRM1Q5JRX3 1037 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 BRMS1LQ5PSV4 323 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 NOP9Q86U38 636 aaKnown RBP19.16■□□□□ 0.66
HOXA3-203ENST00000518451 CCAR2Q8N163 923 aaKnown RBP19.16■□□□□ 0.66
HOXA3-203ENST00000518451 NEK11Q8NG66 645 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 EPS8L1Q8TE68 723 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 MYEOVQ96EZ4 313 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 RPRD1AQ96P16 312 aaPredicted RBP19.16■□□□□ 0.66
HOXA3-203ENST00000518451 NPY6RQ99463 290 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 PRMT1Q99873 361 aaKnown RBP19.16■□□□□ 0.66
HOXA3-203ENST00000518451 GANQ9H2C0 597 aa19.16■□□□□ 0.66
HOXA3-203ENST00000518451 A0A1B0GVM2 712 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 TARSL2A2RTX5 802 aaKnown RBP19.15■□□□□ 0.66
HOXA3-203ENST00000518451 TCAF2A6NFQ2 919 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 MEI4A8MW99 385 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 CDX4O14627 284 aaPredicted RBP19.15■□□□□ 0.66
HOXA3-203ENST00000518451 GFPT2O94808 682 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 ENGP17813 658 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 KCNA4P22459 653 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 SOX5P35711 763 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 UBXN1Q04323 297 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 AUHQ13825 339 aaKnown RBP19.15■□□□□ 0.66
HOXA3-203ENST00000518451 HNRNPA1L2Q32P51 320 aaKnown RBP19.15■□□□□ 0.66
HOXA3-203ENST00000518451 SLC25A52Q3SY17 297 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 TTC31Q49AM3 519 aaPredicted RBP19.15■□□□□ 0.66
HOXA3-203ENST00000518451 FAM102AQ5T9C2 384 aaPredicted RBP19.15■□□□□ 0.66
HOXA3-203ENST00000518451 FBXL22Q6P050 247 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 LRSAM1Q6UWE0 723 aa19.15■□□□□ 0.66
HOXA3-203ENST00000518451 ZNF366Q8N895 744 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms