RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 B3GALT6Q96L58 329 aa27.28■■□□□ 1.96
COL13A1-210ENST00000517713 ATXN2Q99700 1313 aaKnown RBP27.27■■□□□ 1.96
COL13A1-210ENST00000517713 MTSS1O43312 755 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 CA4P22748 312 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 RWDD4Q6NW29 188 aaKnown RBP27.27■■□□□ 1.96
COL13A1-210ENST00000517713 C6orf89Q6UWU4 347 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 PIGWQ7Z7B1 504 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 OSER1Q9NX31 292 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 HCSTQ9UBK5 93 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 NUDT5Q9UKK9 219 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 PCDHA11Q9Y5I1 949 aa27.27■■□□□ 1.96
COL13A1-210ENST00000517713 PAGE1O75459 146 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 ASMTLO95671 621 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 RPA3P35244 121 aaPredicted RBP27.26■■□□□ 1.95
COL13A1-210ENST00000517713 PPP2R5DQ14738 602 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 SLC26A11Q86WA9 606 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 CRIPAKQ8N1N5 446 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 ATAD1Q8NBU5 361 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 GSDMBQ8TAX9 411 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 DEPDC1BQ8WUY9 529 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 SCLYQ96I15 445 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 CABS1Q96KC9 395 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 PAIP2Q9BPZ3 127 aaKnown RBP27.26■■□□□ 1.95
COL13A1-210ENST00000517713 SAMD15Q9P1V8 674 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 ANKRD65E5RJM6 399 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 MTFR1Q15390 333 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 FUT10Q6P4F1 479 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 LRRC6Q86X45 466 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 CTAGE3PQ8IX95 158 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 PPM1NQ8N819 430 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 TGS1Q96RS0 853 aaKnown RBP27.26■■□□□ 1.95
COL13A1-210ENST00000517713 NEU3Q9UQ49 428 aa27.26■■□□□ 1.95
COL13A1-210ENST00000517713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.25■■□□□ 1.95
COL13A1-210ENST00000517713 SDR42E2A6NKP2 422 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 KIAA0754O94854 1291 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 HTR7P34969 479 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 ARPP19P56211 112 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 FAAP100Q0VG06 881 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 IFT88Q13099 833 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 ARHGAP18Q8N392 663 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 TTC9BQ8N6N2 239 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 STAMBPL1Q96FJ0 436 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 SERPINB11Q96P15 392 aa27.25■■□□□ 1.95
COL13A1-210ENST00000517713 ELAC2Q9BQ52 826 aaKnown RBP27.25■■□□□ 1.95
COL13A1-210ENST00000517713 MRPL9Q9BYD2 267 aaKnown RBP27.25■■□□□ 1.95
COL13A1-210ENST00000517713 TBKBP1A7MCY6 615 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 CXorf49A8MYA2 514 aaPredicted RBP27.24■■□□□ 1.95
COL13A1-210ENST00000517713 MT-ND3P03897 115 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 SPARCL1Q14515 664 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 CCDC197Q8NCU1 140 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 ALKBH8Q96BT7 664 aaKnown RBP27.24■■□□□ 1.95
COL13A1-210ENST00000517713 CELF6Q96J87 481 aaKnown RBP27.24■■□□□ 1.95
COL13A1-210ENST00000517713 FCRL2Q96LA5 508 aaPredicted RBP27.24■■□□□ 1.95
COL13A1-210ENST00000517713 TRIM56Q9BRZ2 755 aaKnown RBP27.24■■□□□ 1.95
COL13A1-210ENST00000517713 OGDHLQ9ULD0 1010 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 PLXNA3P51805 1871 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 CORO7P57737 925 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 USP46P62068 366 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 NUGGCQ68CJ6 796 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 YTHDF3Q7Z739 585 aaKnown RBP27.24■■□□□ 1.95
COL13A1-210ENST00000517713 TMEM175Q9BSA9 504 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 TMEM51Q9NW97 253 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 ZNF180Q9UJW8 692 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 TRHDEQ9UKU6 1024 aa27.24■■□□□ 1.95
COL13A1-210ENST00000517713 WDR27A2RRH5 827 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 NT5C1B-RDH14C9J2C7 533 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 ZBTB24O43167 697 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-210ENST00000517713 ZWINTO95229 277 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 GALTP07902 379 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 CPB1P15086 417 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 COG7P83436 770 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 ELAVL2Q12926 359 aaKnown RBP27.23■■□□□ 1.95
COL13A1-210ENST00000517713 TTC39BQ5VTQ0 682 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-210ENST00000517713 VAT1Q99536 393 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 HIPK3Q9H422 1215 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 SMYD2Q9NRG4 433 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 FGFR1OP2Q9NVK5 253 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 IL37Q9NZH6 218 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 GMIPQ9P107 970 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 KCNU1A8MYU2 1149 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 FGF10O15520 208 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-210ENST00000517713 HOXC13P31276 330 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 ATN1P54259 1190 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-210ENST00000517713 CCL23P55773 120 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 SESN2P58004 480 aaPredicted RBP27.23■■□□□ 1.95
COL13A1-210ENST00000517713 SLC1A5Q15758 541 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 TEX44Q53QW1 395 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 MANEALQ5VSG8 457 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 MSANTD2Q6P1R3 559 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 CASC4Q6P4E1 433 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 TBC1D31Q96DN5 1066 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 RNF208Q9H0X6 261 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 CATSPERBQ9H7T0 1116 aa27.23■■□□□ 1.95
COL13A1-210ENST00000517713 TTC3P53804 2025 aa27.22■■□□□ 1.95
COL13A1-210ENST00000517713 FAM159BA6NKW6 160 aa27.22■■□□□ 1.95
COL13A1-210ENST00000517713 FAM155BO75949 473 aa27.22■■□□□ 1.95
COL13A1-210ENST00000517713 MGAT1P26572 445 aa27.22■■□□□ 1.95
COL13A1-210ENST00000517713 FOXN2P32314 431 aa27.22■■□□□ 1.95
COL13A1-210ENST00000517713 ZBTB17Q13105 803 aa27.22■■□□□ 1.95
COL13A1-210ENST00000517713 STEAP4Q687X5 459 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms