RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 KRT37O76014 449 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYO1DO94832 1006 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SNRPAP09012 282 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GSTM1P09488 218 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 INHBBP09529 407 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SPATA31D3P0C874 917 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DLATP10515 647 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CCDC130P13994 396 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 MYL6BP14649 208 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RPS2P15880 293 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GM2AP17900 193 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TCEA1P23193 301 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 EPHB2P29323 1055 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RFC1P35251 1148 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 PGM1P36871 562 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC26A3P40879 764 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 STAT1P42224 750 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CASP2P42575 452 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 MAGEA1P43355 309 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 HARS2P49590 506 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 PRIM2P49643 509 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CASP5P51878 434 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 LINC00310P59036 64 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 HERVK_113P62684 666 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 PRKCEQ02156 737 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF33BQ06732 778 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 EGR3Q06889 387 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 KLHL30Q0D2K2 578 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRRC74AQ0VAA2 488 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CDC16Q13042 620 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 BAMBIQ13145 260 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TCIRG1Q13488 830 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 PNOCQ13519 176 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATP1A4Q13733 1029 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RAPGEF1Q13905 1077 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TOB2Q14106 344 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DHX34Q14147 1143 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 GALNT3Q14435 633 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 NPTX1Q15818 432 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 MAPK6Q16659 721 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 KYNUQ16719 465 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DUSP7Q16829 419 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 LSM12Q3MHD2 195 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TDRD12Q587J7 1177 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACSBG2Q5FVE4 666 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TNFAIP8L3Q5GJ75 292 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TCP11X2Q5H9J9 407 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTC39AQ5SRH9 613 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ARMC4Q5T2S8 1044 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SHEQ5VZ18 495 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CIAPIN1Q6FI81 312 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 UGT2A3Q6UWM9 527 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RANBP10Q6VN20 620 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 KYAT3Q6YP21 454 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SPATA31D4Q6ZUB0 917 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 BTN2A1Q7KYR7 527 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RHOUQ7L0Q8 258 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 EPM2AIP1Q7L775 607 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM124AQ86V42 546 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TSPYL5Q86VY4 417 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 METTL16Q86W50 562 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 HORMAD1Q86X24 394 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ECHDC2Q86YB7 292 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 NT5DC4Q86YG4 428 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DIS3L2Q8IYB7 885 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF34Q8IZ26 560 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SYCE1Q8N0S2 351 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 REXO1Q8N1G1 1221 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 MB21D1Q8N884 522 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ASCC1Q8N9N2 400 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DTWD2Q8NBA8 298 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RBM15BQ8NDT2 890 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTLQ8NG68 377 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TTC8Q8TAM2 541 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SPATA20Q8TB22 786 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 SCFD2Q8WU76 684 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM172AQ8WUF8 416 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CHAC2Q8WUX2 184 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RNF141Q8WVD5 230 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 KBTBD7Q8WVZ9 684 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 NRG4Q8WWG1 115 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATP2A3Q93084 1043 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 VPS33AQ96AX1 596 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TAMM41Q96BW9 452 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 OMA1Q96E52 524 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 RMND5BQ96G75 393 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF578Q96N58 590 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 FERD3LQ96RJ6 166 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TWNKQ96RR1 684 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TM9SF2Q99805 663 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 OSBPL8Q9BZF1 889 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 CCSER1Q9C0I3 900 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 KIAA1683Q9H0B3 1180 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 INTS2Q9H0H0 1204 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 NT5C3AQ9H0P0 336 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 C1orf21Q9H246 121 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 TRIT1Q9H3H1 467 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 DPEP3Q9H4B8 488 aa4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 PHAXQ9H814 394 aaKnown RBP4.94□□□□□ -1.62
HMGB1P19-201ENST00000517578 VPS37BQ9H9H4 285 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms