RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 OR6Y1Q8NGX8 325 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 BORCS5Q969J3 196 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 TIMMDC1Q9NPL8 285 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
PCDHGA6-201ENST00000517434 RAD51BO15315 384 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLC9A1P19634 815 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 PTGER2P43116 358 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 PSEN1P49768 467 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 CRYBB1P53674 252 aaPredicted RBP12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 TUBA4AP68366 448 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 MMRN1Q13201 1228 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 PDK3Q15120 406 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 IRAK1BP1Q5VVH5 260 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 SLFN11Q7Z7L1 901 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 TCAIMQ8N3R3 496 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 ENKURQ8TC29 256 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 SPATA18Q8TC71 538 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 TRPC4APQ8TEL6 797 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 TFB1MQ8WVM0 346 aaKnown RBP12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 ECSITQ9BQ95 431 aa12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 OXCT2Q9BYC2 517 aaPredicted RBP12.52□□□□□ -0.4
PCDHGA6-201ENST00000517434 DYRK3O43781 588 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 RBP3P10745 1247 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 LAG3P18627 525 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 RHOAP61586 193 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 TRIP4Q15650 581 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 SLC5A9Q2M3M2 681 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 OTOP1Q7RTM1 612 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 CARNMT1Q8N4J0 409 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 OXNAD1Q96HP4 312 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 RIC8BQ9NVN3 520 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 KLHL3Q9UH77 587 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 ADAM30Q9UKF2 790 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 AKAP12Q02952 1782 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 F5H423 210 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 RIPK2O43353 540 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 FARP2O94887 1054 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 PGM3O95394 542 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 LRRC8DQ7L1W4 858 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 KBTBD2Q8IY47 623 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 TSPAN14Q8NG11 270 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 TBCBQ99426 244 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 TBC1D10AQ9BXI6 508 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 IL17RBQ9NRM6 502 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 CENPXA8MT69 81 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 AREL1O15033 823 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 PAEPP09466 180 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 FAM153BP0C7A2 387 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 SKIV2L2P42285 1042 aaKnown RBP12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 PTENP60484 403 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 BEX3Q00994 111 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 FAM153CQ494X1 144 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 NOMO2Q5JPE7 1267 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 RNF43Q68DV7 783 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
PCDHGA6-201ENST00000517434 FRMPD4Q14CM0 1322 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 CNTNAP2Q9UHC6 1331 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 GRAP2O75791 330 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 SMIM10L2AP0DMW4 78 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 SMIM10L2BP0DMW5 78 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 SOX11P35716 441 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 SGCGQ13326 291 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 TBCELQ5QJ74 424 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 TRIQKQ629K1 86 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 PDPK2PQ6A1A2 396 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 UNC93AQ86WB7 457 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 AGAP3Q96P47 875 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 C17orf80Q9BSJ5 609 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 C6orf62Q9GZU0 229 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF180Q9UJW8 692 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 EVPLLA8MZ36 301 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 KLHL41O60662 606 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 CTDNEP1O95476 244 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 CSH1P0DML2 217 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 CSH2P0DML3 217 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 CXCL8P10145 99 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 PIK3R1P27986 724 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 DHRSXQ8N5I4 330 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 DLG3Q92796 817 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 YIPF2Q9BWQ6 316 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 GIT1Q9Y2X7 761 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 CES2O00748 559 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 TLL1O43897 1013 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 FESP07332 822 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 BGNP21810 368 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 PSMC6P62333 389 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 CDK16Q00536 496 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 TRAF3Q13114 568 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 USP41Q3LFD5 358 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 COBLL1Q53SF7 1204 aa12.51□□□□□ -0.41
PCDHGA6-201ENST00000517434 PDZK1Q5T2W1 519 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms