RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 RAP1GDS1P52306 607 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 GTF2A1P52655 376 aaPredicted RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 GTF2A2P52657 109 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 RPL10AP62906 217 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 FKBP1BP68106 108 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CCNA1P78396 465 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 IRF9Q00978 393 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MAP2K5Q13163 448 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ITGA7Q13683 1181 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 BLMHQ13867 455 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 KRT81Q14533 505 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 IHHQ14623 411 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CHI3L2Q15782 390 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SV2CQ496J9 727 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 BOLA3Q53S33 107 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PPP6R3Q5H9R7 873 aaPredicted RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 WASHC2DQ5SRD0 308 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 STXBP5Q5T5C0 1151 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TSTD2Q5T7W7 516 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 WDR78Q5VTH9 848 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 HHATQ5VTY9 493 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 AFMIDQ63HM1 303 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 WSCD1Q658N2 575 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 HEATR6Q6AI08 1181 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PM20D1Q6GTS8 502 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 DENND5AQ6IQ26 1287 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 LRRC8BQ6P9F7 803 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TRAF7Q6Q0C0 670 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 C4orf22Q6V702 233 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 KYAT3Q6YP21 454 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 AGMOQ6ZNB7 445 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ZCCHC23Q6ZST2 131 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 RFX8Q6ZV50 586 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CATSPER4Q7RTX7 472 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PLEKHH3Q7Z736 793 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CMC1Q7Z7K0 106 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 RPAINQ86UA6 219 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TMEM135Q86UB9 458 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MTDHQ86UE4 582 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MFSD6LQ8IWD5 586 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CNTN4Q8IWV2 1026 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SCUBE3Q8IX30 993 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ZNF683Q8IZ20 524 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CENPLQ8N0S6 344 aaPredicted RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 VPS52Q8N1B4 723 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PLD6Q8N2A8 252 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TMEM151AQ8N4L1 468 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CNTD1Q8N815 330 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PPM1NQ8N819 430 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 RBM15BQ8NDT2 890 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ARMC2Q8NEN0 867 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 OR10T2Q8NGX3 314 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 HMGCLL1Q8TB92 370 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MAPK15Q8TD08 544 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ACMSDQ8TDX5 336 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 DEPDC1BQ8WUY9 529 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 NSMCE1Q8WV22 266 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 WDR60Q8WVS4 1066 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 DNAJB3Q8WWF6 145 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 HTR3CQ8WXA8 447 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MYLPFQ96A32 169 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TTC17Q96AE7 1141 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MTBPQ96DY7 904 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MRRFQ96E11 262 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CERS2Q96G23 380 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 P2RY11Q96G91 374 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ZNF333Q96JL9 665 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 HEXIM2Q96MH2 286 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ZFP42Q96MM3 310 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 FCRL3Q96P31 734 aaPredicted RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 LRRC37BQ96QE4 947 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TSPAN18Q96SJ8 248 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SLC9A7Q96T83 725 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PARK7Q99497 189 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 LGMNQ99538 433 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 GPR22Q99680 433 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 RBBP8Q99708 897 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 APBA2Q99767 749 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SYT15Q9BQS2 421 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CCDC77Q9BR77 488 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PAAF1Q9BRP4 392 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 DUSP16Q9BY84 665 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TRIM55Q9BYV6 548 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 CEP41Q9BYV8 373 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 GCOM2Q9BZD3 368 aaPredicted RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ULBP1Q9BZM6 244 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SMOC2Q9H3U7 446 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 NOL6Q9H6R4 1146 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SYNCQ9H7C4 482 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 PRDM16Q9HAZ2 1276 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 ALG13Q9NP73 1137 aaKnown RBP3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 XPNPEP3Q9NQH7 507 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 SNX15Q9NRS6 342 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TMLHEQ9NVH6 421 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 NMRK1Q9NWW6 199 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 OSER1Q9NX31 292 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 MIOSQ9NXC5 875 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 KCNK4Q9NYG8 393 aa3.34□□□□□ -1.87
SCARNA20.6-201ENST00000517251 TAS2R1Q9NYW7 299 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms