RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 FGF3P11487 239 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 RFX2P48378 723 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PRIM2P49643 509 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ROR2Q01974 943 aaKnown RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 EGR4Q05215 589 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 LTBQ06643 244 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PMPCAQ10713 525 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SAFBQ15424 915 aaKnown RBP eCLIP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 COBLL1Q53SF7 1204 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ALG10Q5BKT4 473 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ALG10BQ5I7T1 473 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 Q5PR19 223 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ANKRD40Q6AI12 368 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TMEM88Q6PEY1 159 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 Q6ZTC4 211 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 MORC1Q86VD1 984 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 FMNL3Q8IVF7 1028 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CCAR1Q8IX12 1150 aaKnown RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PAQR4Q8N4S7 273 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 RBMXL3Q8N7X1 1067 aaKnown RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GLIS1Q8NBF1 620 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 C7orf57Q8NEG2 295 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ELP5Q8TE02 316 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SLC22A17Q8WUG5 538 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NPIPB3Q92617 1050 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ZNF566Q969W8 418 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 FAM84BQ96KN1 310 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SEZ6LQ9BYH1 1024 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SIRT3Q9NTG7 399 aaPredicted RBP3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D14Q9P2M4 693 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 INSL5Q9Y5Q6 135 aa3.2□□□□□ -1.9
RNU6-1088P-201ENST00000516850 FAM234BA2RU67 622 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 OR6C75A6NL08 312 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 M0QZQ0 153 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PODXLO00592 558 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 MSI1O43347 362 aaKnown RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PAPSS2O95340 614 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ITGA5P08648 1049 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 HOXD3P31249 432 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 HOXA11P31270 313 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SLC4A8Q2Y0W8 1093 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ODF3L2Q3SX64 289 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 KIAA1755Q5JYT7 1200 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 OTUD1Q5VV17 481 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ARL6IP4Q66PJ3 421 aaKnown RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TTLL5Q6EMB2 1281 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ERAP2Q6P179 960 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 MSANTD2Q6P1R3 559 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 Q6ZTK2 550 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 IGFN1Q86VF2 1251 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CAMK1DQ8IU85 385 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 FAM185AQ8N0U4 392 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 WDR60Q8WVS4 1066 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 BRI3BPQ8WY22 251 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 REXO5Q96IC2 774 aaKnown RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PAAF1Q9BRP4 392 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 KRCC1Q9NPI7 259 aaPredicted RBP3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NCKIPSDQ9NZQ3 722 aa3.19□□□□□ -1.9
RNU6-1088P-201ENST00000516850 HNRNPDLO14979 420 aaKnown RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NKX2-8O15522 239 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GLP2RO95838 553 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 WNT1P04628 370 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ACAA1P09110 424 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ALDOCP09972 364 aaKnown RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 HARSP12081 509 aaKnown RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 MT3P25713 68 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CHRNA5P30532 468 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 GRK5P34947 590 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SHC2P98077 582 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 DSC1Q08554 894 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 AAK1Q2M2I8 961 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 FAM209BQ5JX69 171 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ZNF569Q5MCW4 686 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NADSYN1Q6IA69 706 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 HIBCHQ6NVY1 386 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TRILQ7L0X0 811 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CTU1Q7Z7A3 348 aaKnown RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 DPP9Q86TI2 863 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 INPP5DQ92835 1189 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ZNF419Q96HQ0 510 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 LMLNQ96KR4 655 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 ADAD1Q96M93 576 aaKnown RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TM6SF1Q9BZW5 370 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 CDT1Q9H211 546 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 EPS8L2Q9H6S3 715 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 PLAC1Q9HBJ0 212 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 METTL14Q9HCE5 456 aaKnown RBP3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 KCNK9Q9NPC2 374 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 SPAG4Q9NPE6 437 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TM7SF3Q9NS93 570 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 NFU1Q9UMS0 254 aa3.18□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D3DA0A087WVF3 549 aa3.17□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D3IA0A087WXS9 549 aa3.17□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D3EA0A087X179 549 aa3.17□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D3KA0A087X1G2 549 aa3.17□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D3BA6NDS4 549 aa3.17□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D3FA6NER0 549 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1088P-201ENST00000516850 TBC1D3LB9A6J9 549 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms