RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 DEFB4AO15263 64 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TMPRSS2O15393 492 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZSCAN9O15535 394 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC7A4O43246 635 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCNQ3O43525 872 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AP1G1O43747 822 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AHCYL1O43865 530 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NPHS1O60500 1241 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SIN3BO75182 1162 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FRAT2O75474 233 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CA11O75493 328 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM155BO75949 473 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DXOO77932 396 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TOMM70O94826 608 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 UFL1O94874 794 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 STBD1O95210 358 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CELF2O95319 508 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CBX6O95503 412 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KRT75O95678 551 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGKV2D-40P01614 121 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGLV1-47P01700 117 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGHEP01854 428 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TP53P04637 393 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NPM1P06748 294 aaKnown RBP eCLIP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZFYP08048 801 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 VIMP08670 466 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CYP21A2P08686 494 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GIG44P09565 113 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLFN14P0C7P3 912 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM87AP0C7U9 286 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CYP2C8P10632 490 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GNSP15586 552 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PDGFRAP16234 1089 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SELEP16581 610 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGFBP3P17936 291 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 EGR1P18146 543 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PTPRAP18433 802 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BCL3P20749 454 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 EDN2P20800 178 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GPD1P21695 349 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCNA3P22001 575 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PAX6P26367 422 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RPL13P26373 211 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PIK3R1P27986 724 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACADLP28330 430 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IL12BP29460 328 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CD40LGP29965 261 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDC25AP30304 524 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OTX2P32243 289 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SHMT2P34897 504 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GPC1P35052 558 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADRA1AP35348 466 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MSX2P35548 267 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 COILP38432 576 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 WNT5AP41221 380 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HNF4AP41235 474 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TNFSF9P41273 254 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ECI1P42126 302 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ABL2P42684 1182 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PTGIRP43119 386 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RAD52P43351 418 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NSFP46459 744 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RGRP47804 291 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LEPRP48357 1165 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NDUFV1P49821 464 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RNF144AP50876 292 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SCNN1GP51170 649 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CCR5P51681 352 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF157P51786 506 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SUCLG1P53597 346 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NLRP12P59046 1061 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC35A2P78381 396 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PHEXP78562 749 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRR3P79522 188 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 B4GALNT1Q00973 533 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OTUD4Q01804 1114 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BNC1Q01954 994 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TNFRSF17Q02223 184 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TLE1Q04724 770 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PPP2R3AQ06190 1150 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 APLP2Q06481 763 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF763Q0D2J5 394 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FOXD4Q12950 439 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MKRN3Q13064 507 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MPP3Q13368 585 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ITPK1Q13572 414 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DGKZQ13574 1117 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GRAPQ13588 217 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDH18Q13634 790 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IL10RAQ13651 578 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PTK2BQ14289 1009 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF266Q14584 549 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HLXQ14774 488 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GPNMBQ14956 572 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HERC3Q15034 1050 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DAZAP2Q15038 168 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OXA1LQ15070 435 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PWP2Q15269 919 aaKnown RBP-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RGNQ15493 299 aa-0.69□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TEAD2Q15562 447 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms