RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PCDHB7Q9Y5E2 793 aa4.44□□□□□ -1.7
LINC01088-211ENST00000515597 EME2A4GXA9 379 aaPredicted RBP4.43□□□□□ -1.7
LINC01088-211ENST00000515597 A6NNC1 897 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 CAND2O75155 1236 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 HSPA7P48741 367 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 AK2P54819 239 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 DLGAP5Q15398 846 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 RAB30Q15771 203 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 SMTNL2Q2TAL5 461 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 TTLL5Q6EMB2 1281 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 FAM47BQ8NA70 645 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 OR52N4Q8NGI2 321 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 LMLNQ96KR4 655 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 ARHGAP39Q9C0H5 1083 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 RBM38Q9H0Z9 239 aaKnown RBP4.43□□□□□ -1.7
LINC01088-211ENST00000515597 SLC52A1Q9NWF4 448 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
LINC01088-211ENST00000515597 IPO11Q9UI26 975 aaKnown RBP4.43□□□□□ -1.7
LINC01088-211ENST00000515597 LOC105369274A0A096LPK9 316 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 LOC102723532A0A0G2JNH3 316 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 H0YGN5 161 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 TNFRSF13BO14836 293 aaPredicted RBP4.42□□□□□ -1.7
LINC01088-211ENST00000515597 NKX2-8O15522 239 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 PRC1O43663 620 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 PLA2G6O60733 806 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 CNTN5O94779 1100 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 KAT7O95251 611 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 WNT1P04628 370 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 KRT18P05783 430 aaKnown RBP4.42□□□□□ -1.7
LINC01088-211ENST00000515597 ANXA6P08133 673 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 TBXAS1P24557 533 aaPredicted RBP4.42□□□□□ -1.7
LINC01088-211ENST00000515597 SLC37A1P57057 533 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 KIAA1755Q5JYT7 1200 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 ISM2Q6H9L7 571 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 KSR2Q6VAB6 950 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 SLC39A5Q6ZMH5 540 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 TRAPPC11Q7Z392 1133 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 OR4N4Q8N0Y3 316 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 PAQR4Q8N4S7 273 aaPredicted RBP4.42□□□□□ -1.7
LINC01088-211ENST00000515597 EXD3Q8N9H8 876 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 SRFBP1Q8NEF9 429 aaKnown RBP4.42□□□□□ -1.7
LINC01088-211ENST00000515597 OIT3Q8WWZ8 545 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 NEUROG1Q92886 237 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 ATP2A3Q93084 1043 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 CLMNQ96JQ2 1002 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 CCDC138Q96M89 665 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 WDR83Q9BRX9 315 aaKnown RBP4.42□□□□□ -1.7
LINC01088-211ENST00000515597 STK33Q9BYT3 514 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 CERS4Q9HA82 394 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 PRDM16Q9HAZ2 1276 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 PHTF1Q9UMS5 762 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 CEP83Q9Y592 693 aa4.42□□□□□ -1.7
LINC01088-211ENST00000515597 IFITM10A6NMD0 228 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 NBPF7P0C2Y1 421 aaPredicted RBP4.41□□□□□ -1.7
LINC01088-211ENST00000515597 CHRNB1P11230 501 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 IGFBP2P18065 325 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 TGM2P21980 687 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 MT3P25713 68 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 GRM4Q14833 912 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 AAK1Q2M2I8 961 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 KRTAP27-1Q3LI81 207 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 PIK3CD-AS1Q5SR53 167 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 DDIASQ8IXT1 998 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 PARD3BQ8TEW8 1205 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 KIAA1191Q96A73 305 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 DOCK7Q96N67 2140 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 ZNF347Q96SE7 839 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 MEIS3Q99687 375 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 ABHD14AQ9BUJ0 271 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 HTATIP2Q9BUP3 242 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 TXLNGQ9NUQ3 528 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 PCDHA7Q9UN72 937 aa4.41□□□□□ -1.7
LINC01088-211ENST00000515597 C3orf70A6NLC5 250 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-211ENST00000515597 SPTLC2O15270 562 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 KRT86O43790 486 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 NPPBP16860 134 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 TLE3Q04726 772 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 GAD2Q05329 585 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 KRT81Q14533 505 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 C6orf10Q5SRN2 563 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 ASPHD1Q5U4P2 390 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 CAPRIN2Q6IMN6 1127 aaKnown RBP4.4□□□□□ -1.71
LINC01088-211ENST00000515597 LRIG3Q6UXM1 1119 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 TRABD2AQ86V40 505 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 SPATA2LQ8IUW3 424 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-211ENST00000515597 ADGRF3Q8IZF5 1079 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 ADPRHL1Q8NDY3 354 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 C18orf8Q96DM3 657 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 MCRS1Q96EZ8 462 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 MED30Q96HR3 178 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 FAM84BQ96KN1 310 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-211ENST00000515597 SGCZQ96LD1 299 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 EPS8L2Q9H6S3 715 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 ARNT2Q9HBZ2 717 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 FZD3Q9NPG1 666 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 SELENONQ9NZV5 590 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 FNIP2Q9P278 1114 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 UTS2RQ9UKP6 389 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 NFU1Q9UMS0 254 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms