RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SLC47A2Q86VL8 602 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 ZDHHC17Q8IUH5 632 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 TMEM35BQ8NCS4 154 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 DEFB124Q8NES8 71 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 GANCQ8TET4 914 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 GBP4Q96PP9 640 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 SLC2A13Q96QE2 648 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 PCED1AQ9H1Q7 454 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 PRSS16Q9NQE7 514 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 EML5Q05BV3 1969 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 RALGAPA1Q6GYQ0 2036 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 NCOR2Q9Y618 2525 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 SPAG17Q6Q759 2223 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 GOLGA6L22H0YM25 854 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 IGLV3-25P01717 112 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 SRPRAP08240 638 aaKnown RBP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 PMLP29590 882 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 CLCN1P35523 988 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 NNMTP40261 264 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 OXCT1P55809 520 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 RPS14P62263 151 aaKnown RBP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 SLC6A3Q01959 620 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 ZNF252P-AS1Q0IIN9 211 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 NME3Q13232 169 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 DRAP1Q14919 205 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 TCP11X2Q5H9J9 407 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 PITRM1Q5JRX3 1037 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 MIIPQ5JXC2 388 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 KLHDC7AQ5VTJ3 777 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 ZNF776Q68DI1 518 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 LRSAM1Q6UWE0 723 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 FAM183BPQ6ZVS7 135 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 SND1Q7KZF4 910 aaKnown RBP eCLIP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 FAM71AQ8IYT1 594 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 ABCA7Q8IZY2 2146 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 MINDY1Q8N5J2 469 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 KDM1BQ8NB78 822 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 MSANTD4Q8NCY6 345 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 DNASE2BQ8WZ79 361 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 SNX19Q92543 992 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 PPP1R9BQ96SB3 815 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 ZDHHC5Q9C0B5 715 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 BTBD1Q9H0C5 482 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 SAMSN1Q9NSI8 373 aaKnown RBP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 RRN3Q9NYV6 651 aa14.13□□□□□ -0.15
TCOF1-215ENST00000515516 XPO7Q9UIA9 1087 aaKnown RBP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 AJAP1Q9UKB5 411 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-215ENST00000515516 GIPC1O14908 333 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 BCAT2O15382 392 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-215ENST00000515516 DAB1O75553 588 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 ERBB2P04626 1255 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 PNMA6AP0CW24 399 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-215ENST00000515516 NOS2P35228 1153 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 RDXP35241 583 aaKnown RBP14.12□□□□□ -0.15
TCOF1-215ENST00000515516 RNASE9P60153 205 aaKnown RBP14.12□□□□□ -0.15
TCOF1-215ENST00000515516 ECT2LQ008S8 904 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 SLC12A1Q13621 1099 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 FSCBQ5H9T9 825 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 OLFML1Q6UWY5 402 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 CLEC17AQ6ZS10 378 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 ZCCHC9Q8N567 271 aaKnown RBP14.12□□□□□ -0.15
TCOF1-215ENST00000515516 ENOX1Q8TC92 643 aaKnown RBP14.12□□□□□ -0.15
TCOF1-215ENST00000515516 MYEOVQ96EZ4 313 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 LMLNQ96KR4 655 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 RPRD1AQ96P16 312 aaPredicted RBP14.12□□□□□ -0.15
TCOF1-215ENST00000515516 SGK2Q9HBY8 427 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 PLCB1Q9NQ66 1216 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 LMBRD1Q9NUN5 540 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 TMEM51Q9NW97 253 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 STAP1Q9ULZ2 295 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 SCML1Q9UN30 329 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 ERVW-1Q9UQF0 538 aa14.12□□□□□ -0.15
TCOF1-215ENST00000515516 THADAQ6YHU6 1953 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 EDDM13A0A1B0GTR0 161 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 TARSL2A2RTX5 802 aaKnown RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 UPK3BL1B0FP48 263 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 UPK3BL2E5RIL1 263 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 M0QYT0 321 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 SEMA4FO95754 770 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 CYP11B1P15538 503 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 MATKP42679 507 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 PITX1P78337 314 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 SHC2P98077 582 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 SULT2A1Q06520 285 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 FOXC1Q12948 553 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 SEMA3BQ13214 749 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 HNRNPDQ14103 355 aaKnown RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 HNRNPA1L2Q32P51 320 aaKnown RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 PTPN20Q4JDL3 420 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 FKBP15Q5T1M5 1219 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 TAF3Q5VWG9 929 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 SASS6Q6UVJ0 657 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 IL27RAQ6UWB1 636 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 MMS22LQ6ZRQ5 1243 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 SLC26A9Q7LBE3 791 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 ERICH1Q86X53 443 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 DHX40Q8IX18 779 aaKnown RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 ZNF397Q8NF99 534 aaPredicted RBP14.11□□□□□ -0.15
TCOF1-215ENST00000515516 C18orf8Q96DM3 657 aa14.11□□□□□ -0.15
TCOF1-215ENST00000515516 STK33Q9BYT3 514 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms